Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:60045102-61445257

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D15Mit128 15 60066583 to 60066716 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 128
Gm25875 15 60084788 to 60084894 106 + snRNA gene predicted gene, 25875
Tssr131396 15 60112148 to 60112157 9 + TSS region transcription start site region 131396
Gm2682 15 60120540 to 60187408 66868 - lincRNA gene predicted gene 2682
Tssr134454 15 60122410 to 60122412 2 - TSS region transcription start site region 134454
Tssr134455 15 60129997 to 60130003 6 - TSS region transcription start site region 134455
Gm41331 15 60141470 to 60187420 45950 + lncRNA gene predicted gene, 41331
Tssr134456 15 60141619 to 60141653 34 - TSS region transcription start site region 134456
Tssr134457 15 60141718 to 60141731 13 - TSS region transcription start site region 134457
Tssr131397 15 60141903 to 60141908 5 + TSS region transcription start site region 131397
Tssr131398 15 60142075 to 60142091 16 + TSS region transcription start site region 131398
Tssr134458 15 60149706 to 60149727 21 - TSS region transcription start site region 134458
Tssr134459 15 60164555 to 60164558 3 - TSS region transcription start site region 134459
Tssr134460 15 60186886 to 60186897 11 - TSS region transcription start site region 134460
Tssr134461 15 60187027 to 60187031 4 - TSS region transcription start site region 134461
Tssr134462 15 60187114 to 60187133 19 - TSS region transcription start site region 134462
Tssr134463 15 60187174 to 60187183 9 - TSS region transcription start site region 134463
Tssr4605 15 60187204 to 60187209 5 - TSS region transcription start site region 4605
Tssr134464 15 60187268 to 60187283 15 - TSS region transcription start site region 134464
Tssr134465 15 60187322 to 60187331 9 - TSS region transcription start site region 134465
Tssr134466 15 60187335 to 60187340 5 - TSS region transcription start site region 134466
Tssr134467 15 60187371 to 60187383 12 - TSS region transcription start site region 134467
Tssr134468 15 60187398 to 60187415 17 - TSS region transcription start site region 134468
Tssr134469 15 60187429 to 60187463 34 - TSS region transcription start site region 134469
Gm46507 15 60295792 to 60296950 1158 - pseudogene predicted gene, 46507
Gm4774 15 60392119 to 60393169 1050 + pseudogene predicted gene 4774
Gm17892 15 60397297 to 60398089 792 + pseudogene predicted gene, 17892
Tssr131399 15 60468055 to 60468064 9 + TSS region transcription start site region 131399
Gm6392 15 60468124 to 60469477 1353 + pseudogene predicted gene 6392
D15Mit210 15 60587743 to 60587866 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 210
Gm48946 15 60670343 to 60672084 1741 + lincRNA gene predicted gene, 48946
D15Mit196 15 60679818 to 60679947 129 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 196
Gm23835 15 60703992 to 60704123 131 - snoRNA gene predicted gene, 23835
Tssr4606 15 60742826 to 60742828 2 + TSS region transcription start site region 4606
Gm7086 15 60742856 to 60746524 3668 + pseudogene predicted pseudogene 7086
Tssr134470 15 60744915 to 60744918 3 - TSS region transcription start site region 134470
Cpgi7128 15 60745102 to 60745257 155 CpG island CpG island 7128
Gm48947 15 60760231 to 60760744 513 + pseudogene predicted gene, 48947
Lratd2 15 60818996 to 60825599 6603 - protein coding gene LRAT domain containing 1
Tssr134471 15 60819716 to 60819720 4 - TSS region transcription start site region 134471
Tssr134472 15 60819840 to 60819857 17 - TSS region transcription start site region 134472
Tssr134473 15 60820137 to 60820179 42 - TSS region transcription start site region 134473
Tssr134474 15 60822205 to 60822232 27 - TSS region transcription start site region 134474
Cpgi7129 15 60822703 to 60825132 2429 CpG island CpG island 7129
Tssr131400 15 60822947 to 60822970 23 + TSS region transcription start site region 131400
9930014A18Rik 15 60822965 to 60831400 8435 + lncRNA gene RIKEN cDNA 9930014A18 gene
Tssr131401 15 60822979 to 60822990 11 + TSS region transcription start site region 131401
Tssr131402 15 60823943 to 60823956 13 + TSS region transcription start site region 131402
Tssr134475 15 60824857 to 60824872 15 - TSS region transcription start site region 134475
Tssr134476 15 60824884 to 60824895 11 - TSS region transcription start site region 134476
Tssr134477 15 60824903 to 60824917 14 - TSS region transcription start site region 134477
Tssr134478 15 60824919 to 60824924 5 - TSS region transcription start site region 134478
Tssr134479 15 60824942 to 60824966 24 - TSS region transcription start site region 134479
D15Mit46 15 60826658 to 60826805 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 46
Tssr134480 15 60836317 to 60836319 2 - TSS region transcription start site region 134480
A1bg 15 60917589 to 60921270 3681 - protein coding gene alpha-1-B glycoprotein
Tssr134481 15 60921280 to 60921288 8 - TSS region transcription start site region 134481
Gm48951 15 60938347 to 60938636 289 - pseudogene predicted gene, 48951
4930402D18Rik 15 60953304 to 60967339 14035 + antisense lncRNA gene RIKEN cDNA 4930402D18 gene
Tssr131403 15 61157829 to 61157848 19 + TSS region transcription start site region 131403
Gm38563 15 61157869 to 61165735 7866 + lincRNA gene predicted gene, 38563
Gm49497 15 61184151 to 61241065 56914 + lincRNA gene predicted gene, 49497
Gm29904 15 61288441 to 61331370 42929 + lincRNA gene predicted gene, 29904
D15Mit88 15 61353425 to 61353634 209 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 88
Gm24696 15 61357871 to 61358004 133 - snoRNA gene predicted gene, 24696
Tssr131404 15 61389635 to 61389636 1 + TSS region transcription start site region 131404
Tssr134482 15 61441657 to 61441686 29 - TSS region transcription start site region 134482