Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:59922869-62400735

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146 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7708 15 59929618 to 59930290 672 - pseudogene predicted gene 7708
D15Mit167 15 59974914 to 59975033 119 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 167
Gm7083 15 59977722 to 59978171 449 + pseudogene predicted gene 7083
Gm7713 15 59994065 to 59994910 845 - pseudogene predicted gene 7713
Tssr134452 15 59994956 to 59994961 5 - TSS region transcription start site region 134452
4933412E24Rik 15 60014866 to 60016613 1747 - protein coding gene RIKEN cDNA 4933412E24 gene
Tssr134453 15 60016588 to 60016623 35 - TSS region transcription start site region 134453
D15Mit128 15 60066583 to 60066716 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 128
Gm25875 15 60084788 to 60084894 106 + snRNA gene predicted gene, 25875
Tssr131396 15 60112148 to 60112157 9 + TSS region transcription start site region 131396
Gm2682 15 60120540 to 60187408 66868 - lincRNA gene predicted gene 2682
Tssr134454 15 60122410 to 60122412 2 - TSS region transcription start site region 134454
Tssr134455 15 60129997 to 60130003 6 - TSS region transcription start site region 134455
Gm41331 15 60141470 to 60187420 45950 + lncRNA gene predicted gene, 41331
Tssr134456 15 60141619 to 60141653 34 - TSS region transcription start site region 134456
Tssr134457 15 60141718 to 60141731 13 - TSS region transcription start site region 134457
Tssr131397 15 60141903 to 60141908 5 + TSS region transcription start site region 131397
Tssr131398 15 60142075 to 60142091 16 + TSS region transcription start site region 131398
Tssr134458 15 60149706 to 60149727 21 - TSS region transcription start site region 134458
Tssr134459 15 60164555 to 60164558 3 - TSS region transcription start site region 134459
Tssr134460 15 60186886 to 60186897 11 - TSS region transcription start site region 134460
Tssr134461 15 60187027 to 60187031 4 - TSS region transcription start site region 134461
Tssr134462 15 60187114 to 60187133 19 - TSS region transcription start site region 134462
Tssr134463 15 60187174 to 60187183 9 - TSS region transcription start site region 134463
Tssr4605 15 60187204 to 60187209 5 - TSS region transcription start site region 4605
Tssr134464 15 60187268 to 60187283 15 - TSS region transcription start site region 134464
Tssr134465 15 60187322 to 60187331 9 - TSS region transcription start site region 134465
Tssr134466 15 60187335 to 60187340 5 - TSS region transcription start site region 134466
Tssr134467 15 60187371 to 60187383 12 - TSS region transcription start site region 134467
Tssr134468 15 60187398 to 60187415 17 - TSS region transcription start site region 134468
Tssr134469 15 60187429 to 60187463 34 - TSS region transcription start site region 134469
Gm46507 15 60295792 to 60296950 1158 - pseudogene predicted gene, 46507
Gm4774 15 60392119 to 60393169 1050 + pseudogene predicted gene 4774
Gm17892 15 60397297 to 60398089 792 + pseudogene predicted gene, 17892
Tssr131399 15 60468055 to 60468064 9 + TSS region transcription start site region 131399
Gm6392 15 60468124 to 60469477 1353 + pseudogene predicted gene 6392
D15Mit210 15 60587743 to 60587866 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 210
Gm48946 15 60670343 to 60672084 1741 + lincRNA gene predicted gene, 48946
D15Mit196 15 60679818 to 60679947 129 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 196
Gm23835 15 60703992 to 60704123 131 - snoRNA gene predicted gene, 23835
Tssr4606 15 60742826 to 60742828 2 + TSS region transcription start site region 4606
Gm7086 15 60742856 to 60746524 3668 + pseudogene predicted pseudogene 7086
Tssr134470 15 60744915 to 60744918 3 - TSS region transcription start site region 134470
Cpgi7128 15 60745102 to 60745257 155 CpG island CpG island 7128
Gm48947 15 60760231 to 60760744 513 + pseudogene predicted gene, 48947
Lratd2 15 60818996 to 60825599 6603 - protein coding gene LRAT domain containing 1
Tssr134471 15 60819716 to 60819720 4 - TSS region transcription start site region 134471
Tssr134472 15 60819840 to 60819857 17 - TSS region transcription start site region 134472
Tssr134473 15 60820137 to 60820179 42 - TSS region transcription start site region 134473
Tssr134474 15 60822205 to 60822232 27 - TSS region transcription start site region 134474
Cpgi7129 15 60822703 to 60825132 2429 CpG island CpG island 7129
Tssr131400 15 60822947 to 60822970 23 + TSS region transcription start site region 131400
9930014A18Rik 15 60822965 to 60831400 8435 + lncRNA gene RIKEN cDNA 9930014A18 gene
Tssr131401 15 60822979 to 60822990 11 + TSS region transcription start site region 131401
Tssr131402 15 60823943 to 60823956 13 + TSS region transcription start site region 131402
Tssr134475 15 60824857 to 60824872 15 - TSS region transcription start site region 134475
Tssr134476 15 60824884 to 60824895 11 - TSS region transcription start site region 134476
Tssr134477 15 60824903 to 60824917 14 - TSS region transcription start site region 134477
Tssr134478 15 60824919 to 60824924 5 - TSS region transcription start site region 134478
Tssr134479 15 60824942 to 60824966 24 - TSS region transcription start site region 134479
D15Mit46 15 60826658 to 60826805 147 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 46
Tssr134480 15 60836317 to 60836319 2 - TSS region transcription start site region 134480
A1bg 15 60917589 to 60921270 3681 - protein coding gene alpha-1-B glycoprotein
Tssr134481 15 60921280 to 60921288 8 - TSS region transcription start site region 134481
Gm48951 15 60938347 to 60938636 289 - pseudogene predicted gene, 48951
4930402D18Rik 15 60953304 to 60967339 14035 + antisense lncRNA gene RIKEN cDNA 4930402D18 gene
Tssr131403 15 61157829 to 61157848 19 + TSS region transcription start site region 131403
Gm38563 15 61157869 to 61165735 7866 + lincRNA gene predicted gene, 38563
Gm49497 15 61184151 to 61241065 56914 + lincRNA gene predicted gene, 49497
Gm29904 15 61288441 to 61331370 42929 + lincRNA gene predicted gene, 29904
D15Mit88 15 61353425 to 61353634 209 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 88
Gm24696 15 61357871 to 61358004 133 - snoRNA gene predicted gene, 24696
Tssr131404 15 61389635 to 61389636 1 + TSS region transcription start site region 131404
Tssr134482 15 61441657 to 61441686 29 - TSS region transcription start site region 134482
Gm49498 15 61534676 to 61544183 9507 - lincRNA gene predicted gene, 49498
Tssr134483 15 61546439 to 61546450 11 - TSS region transcription start site region 134483
D15Ertd489e 15 61557801 to 61558037 236 DNA segment DNA segment, Chr 15, ERATO Doi 489, expressed
D15Mit207 15 61648168 to 61648276 108 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 207
Vtbt17 15 61681464 to 61681588 124 QTL vertebral trabecular bone trait 17
D15Mit209 15 61681464 to 61681588 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 209
D030024E09Rik 15 61699284 to 61774451 75167 - lincRNA gene RIKEN cDNA D030024E09 gene
Gm18154 15 61826247 to 61826835 588 + pseudogene predicted gene, 18154
D15Mit168 15 61921442 to 61921590 148 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 168
D15Mit27 15 61934830 to 61935034 204 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 27
Gm18788 15 61962870 to 61963483 613 + pseudogene predicted gene, 18788
Gm37947 15 61979241 to 61983302 4061 - unclassified gene predicted gene, 37947
Cpgi7130 15 61984876 to 61988361 3485 CpG island CpG island 7130
Tssr134484 15 61985157 to 61985174 17 - TSS region transcription start site region 134484
Tssr131405 15 61985377 to 61985397 20 + TSS region transcription start site region 131405
Myc 15 61985391 to 61990374 4983 + protein coding gene myelocytomatosis oncogene
Tssr131406 15 61985540 to 61985556 16 + TSS region transcription start site region 131406
Tssr131407 15 61987038 to 61987059 21 + TSS region transcription start site region 131407
D15Kyo1 15 61987280 to 61987432 152 DNA segment DNA segment, Chr 15, Kyoto University 1
D15Mit17 15 61987292 to 61987432 140 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 17
Tria2 15 61987292 to 61987432 140 QTL T cell receptor induced activation 2
Tssr131408 15 61987304 to 61987318 14 + TSS region transcription start site region 131408
Tssr131409 15 61987359 to 61987388 29 + TSS region transcription start site region 131409
Tssr131410 15 61987410 to 61987491 81 + TSS region transcription start site region 131410
Tssr131411 15 61987492 to 61987521 29 + TSS region transcription start site region 131411
Tssr131412 15 61987608 to 61987623 15 + TSS region transcription start site region 131412
Tssr131413 15 61987679 to 61987753 74 + TSS region transcription start site region 131413
Tssr131414 15 61987791 to 61987800 9 + TSS region transcription start site region 131414
Tssr131415 15 61988018 to 61988116 98 + TSS region transcription start site region 131415
Tssr131416 15 61988164 to 61988173 9 + TSS region transcription start site region 131416
Tssr131417 15 61988226 to 61988237 11 + TSS region transcription start site region 131417
Tssr131418 15 61988244 to 61988251 7 + TSS region transcription start site region 131418
Tssr131419 15 61988957 to 61988961 4 + TSS region transcription start site region 131419
Tssr131420 15 61989392 to 61989405 13 + TSS region transcription start site region 131420
Tssr131421 15 61989417 to 61989435 18 + TSS region transcription start site region 131421
Cpgi7131 15 61989432 to 61989731 299 CpG island CpG island 7131
Tssr131422 15 61989441 to 61989454 13 + TSS region transcription start site region 131422
Tssr131423 15 61989482 to 61989494 12 + TSS region transcription start site region 131423
Tssr134485 15 61989543 to 61989558 15 - TSS region transcription start site region 134485
Tssr131424 15 61989556 to 61989567 11 + TSS region transcription start site region 131424
Tssr131425 15 61990034 to 61990058 24 + TSS region transcription start site region 131425
Tssr131426 15 61990104 to 61990109 5 + TSS region transcription start site region 131426
Cpgi7132 15 62037045 to 62037273 228 CpG island CpG island 7132
Cpgi7133 15 62037636 to 62038285 649 CpG island CpG island 7133
Pvt1 15 62037986 to 62260215 222229 + lincRNA gene Pvt1 oncogene
Tssr131427 15 62037996 to 62038058 62 + TSS region transcription start site region 131427
Gm27913 15 62038029 to 62038201 172 + unclassified non-coding RNA gene predicted gene, 27913
Tssr134486 15 62039138 to 62039154 16 - TSS region transcription start site region 134486
Tssr134487 15 62039159 to 62039172 13 - TSS region transcription start site region 134487
Tssr131428 15 62039216 to 62039262 46 + TSS region transcription start site region 131428
Tssr131429 15 62039284 to 62039292 8 + TSS region transcription start site region 131429
Tssr131430 15 62056799 to 62056803 4 + TSS region transcription start site region 131430
Tssr131431 15 62060777 to 62060782 5 + TSS region transcription start site region 131431
Tssr131432 15 62080019 to 62080024 5 + TSS region transcription start site region 131432
Gm27782 15 62080245 to 62080443 198 + unclassified non-coding RNA gene predicted gene, 27782
Tssr131433 15 62086289 to 62086293 4 + TSS region transcription start site region 131433
Tssr134488 15 62092718 to 62092756 38 - TSS region transcription start site region 134488
Gm27718 15 62107187 to 62107272 85 + unclassified non-coding RNA gene predicted gene, 27718
Tssr131434 15 62152949 to 62152999 50 + TSS region transcription start site region 131434
Tssr131435 15 62169963 to 62169967 4 + TSS region transcription start site region 131435
Gm27957 15 62175422 to 62175548 126 + unclassified non-coding RNA gene predicted gene, 27957
Tssr131436 15 62178262 to 62178286 24 + TSS region transcription start site region 131436
Tssr131437 15 62181745 to 62181761 16 + TSS region transcription start site region 131437
H2afy3 15 62218221 to 62219332 1111 - pseudogene H2A histone family, member Y3
Tssr134489 15 62219446 to 62219452 6 - TSS region transcription start site region 134489
Tssr131438 15 62220510 to 62220517 7 + TSS region transcription start site region 131438
Tssr131439 15 62246524 to 62246528 4 + TSS region transcription start site region 131439
Tssr131440 15 62250553 to 62250556 3 + TSS region transcription start site region 131440
2900056L01Rik 15 62259291 to 62260214 923 unclassified gene RIKEN cDNA 2900056L01 gene
Tssr131441 15 62264414 to 62264418 4 + TSS region transcription start site region 131441
Tssr131442 15 62328715 to 62328721 6 + TSS region transcription start site region 131442
Tssr4607 15 62339522 to 62339524 2 - TSS region transcription start site region 4607