Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:59496588-60536623

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsmce2 15 59374247 to 59601684 227437 + protein coding gene NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
Tssr131376 15 59522988 to 59522993 5 + TSS region transcription start site region 131376
Tssr134438 15 59524580 to 59524588 8 - TSS region transcription start site region 134438
Tssr134439 15 59524623 to 59524662 39 - TSS region transcription start site region 134439
Tssr134440 15 59525575 to 59525588 13 - TSS region transcription start site region 134440
Tssr131377 15 59525892 to 59525894 2 + TSS region transcription start site region 131377
Tssr134441 15 59542200 to 59542203 3 - TSS region transcription start site region 134441
Tssr131378 15 59599108 to 59599136 28 + TSS region transcription start site region 131378
Tssr134442 15 59604300 to 59604323 23 - TSS region transcription start site region 134442
Tssr131379 15 59612105 to 59612110 5 + TSS region transcription start site region 131379
Tssr131380 15 59618285 to 59618295 10 + TSS region transcription start site region 131380
Gm36677 15 59618590 to 59619055 465 + lincRNA gene predicted gene, 36677
Tssr131381 15 59618684 to 59618715 31 + TSS region transcription start site region 131381
Tssr131382 15 59620088 to 59620104 16 + TSS region transcription start site region 131382
Tssr131383 15 59620265 to 59620279 14 + TSS region transcription start site region 131383
Tssr134443 15 59646354 to 59646358 4 - TSS region transcription start site region 134443
Cpgi7127 15 59647439 to 59649845 2406 CpG island CpG island 7127
Tssr134444 15 59648095 to 59648136 41 - TSS region transcription start site region 134444
Tssr134445 15 59648142 to 59648168 26 - TSS region transcription start site region 134445
Tssr131384 15 59648297 to 59648307 10 + TSS region transcription start site region 131384
Tssr131385 15 59648356 to 59648369 13 + TSS region transcription start site region 131385
Tssr131386 15 59648422 to 59648431 9 + TSS region transcription start site region 131386
Tssr131387 15 59648503 to 59648537 34 + TSS region transcription start site region 131387
Tssr131388 15 59648550 to 59648561 11 + TSS region transcription start site region 131388
Tssr131389 15 59648578 to 59648589 11 + TSS region transcription start site region 131389
Tssr131390 15 59648644 to 59648687 43 + TSS region transcription start site region 131390
Trib1 15 59648654 to 59657099 8445 + protein coding gene tribbles pseudokinase 1
Tssr131391 15 59648694 to 59648705 11 + TSS region transcription start site region 131391
Tssr4603 15 59650270 to 59650277 7 - TSS region transcription start site region 4603
Tssr134446 15 59650603 to 59650614 11 - TSS region transcription start site region 134446
Tssr131392 15 59650724 to 59650757 33 + TSS region transcription start site region 131392
Tssr134447 15 59652831 to 59652842 11 - TSS region transcription start site region 134447
Tssr134448 15 59652844 to 59652856 12 - TSS region transcription start site region 134448
Tssr134449 15 59652902 to 59652914 12 - TSS region transcription start site region 134449
Tssr131393 15 59653085 to 59653133 48 + TSS region transcription start site region 131393
Tssr131394 15 59653411 to 59653423 12 + TSS region transcription start site region 131394
Gm20150 15 59671622 to 59672101 479 - pseudogene predicted gene, 20150
Tssr131395 15 59695818 to 59695819 1 + TSS region transcription start site region 131395
D15Mit50 15 59719678 to 59719820 142 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 50
Tssr4604 15 59739279 to 59739305 26 - TSS region transcription start site region 4604
Gm19510 15 59788417 to 59794959 6542 - lincRNA gene predicted gene, 19510
Tssr134450 15 59794954 to 59794959 5 - TSS region transcription start site region 134450
Tssr134451 15 59795766 to 59795777 11 - TSS region transcription start site region 134451
Gm36819 15 59823417 to 59831605 8188 + lncRNA gene predicted gene, 36819
Gm7708 15 59929618 to 59930290 672 - pseudogene predicted gene 7708
D15Mit167 15 59974914 to 59975033 119 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 167
Gm7083 15 59977722 to 59978171 449 + pseudogene predicted gene 7083
Gm7713 15 59994065 to 59994910 845 - pseudogene predicted gene 7713
Tssr134452 15 59994956 to 59994961 5 - TSS region transcription start site region 134452
4933412E24Rik 15 60014866 to 60016613 1747 - protein coding gene RIKEN cDNA 4933412E24 gene
Tssr134453 15 60016588 to 60016623 35 - TSS region transcription start site region 134453
D15Mit128 15 60066583 to 60066716 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 128
Gm25875 15 60084788 to 60084894 106 + snRNA gene predicted gene, 25875
Tssr131396 15 60112148 to 60112157 9 + TSS region transcription start site region 131396
Gm2682 15 60120540 to 60187408 66868 - lincRNA gene predicted gene 2682
Tssr134454 15 60122410 to 60122412 2 - TSS region transcription start site region 134454
Tssr134455 15 60129997 to 60130003 6 - TSS region transcription start site region 134455
Gm41331 15 60141470 to 60187420 45950 + lncRNA gene predicted gene, 41331
Tssr134456 15 60141619 to 60141653 34 - TSS region transcription start site region 134456
Tssr134457 15 60141718 to 60141731 13 - TSS region transcription start site region 134457
Tssr131397 15 60141903 to 60141908 5 + TSS region transcription start site region 131397
Tssr131398 15 60142075 to 60142091 16 + TSS region transcription start site region 131398
Tssr134458 15 60149706 to 60149727 21 - TSS region transcription start site region 134458
Tssr134459 15 60164555 to 60164558 3 - TSS region transcription start site region 134459
Tssr134460 15 60186886 to 60186897 11 - TSS region transcription start site region 134460
Tssr134461 15 60187027 to 60187031 4 - TSS region transcription start site region 134461
Tssr134462 15 60187114 to 60187133 19 - TSS region transcription start site region 134462
Tssr134463 15 60187174 to 60187183 9 - TSS region transcription start site region 134463
Tssr4605 15 60187204 to 60187209 5 - TSS region transcription start site region 4605
Tssr134464 15 60187268 to 60187283 15 - TSS region transcription start site region 134464
Tssr134465 15 60187322 to 60187331 9 - TSS region transcription start site region 134465
Tssr134466 15 60187335 to 60187340 5 - TSS region transcription start site region 134466
Tssr134467 15 60187371 to 60187383 12 - TSS region transcription start site region 134467
Tssr134468 15 60187398 to 60187415 17 - TSS region transcription start site region 134468
Tssr134469 15 60187429 to 60187463 34 - TSS region transcription start site region 134469
Gm46507 15 60295792 to 60296950 1158 - pseudogene predicted gene, 46507
Gm4774 15 60392119 to 60393169 1050 + pseudogene predicted gene 4774
Gm17892 15 60397297 to 60398089 792 + pseudogene predicted gene, 17892
Tssr131399 15 60468055 to 60468064 9 + TSS region transcription start site region 131399
Gm6392 15 60468124 to 60469477 1353 + pseudogene predicted gene 6392