Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:58744323-58894478

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41329 15 58759887 to 58763828 3941 + lncRNA gene predicted gene, 41329
Gm20712 15 58780461 to 58781951 1490 - sense overlapping lncRNA gene predicted gene 20712
Tmem65 15 58782269 to 58823638 41369 - protein coding gene transmembrane protein 65
Tssr131346 15 58802783 to 58802794 11 + TSS region transcription start site region 131346
Tssr134402 15 58818128 to 58818133 5 - TSS region transcription start site region 134402
Gm24041 15 58819323 to 58819478 155 - snRNA gene predicted gene, 24041
Cpgi7117 15 58822511 to 58824170 1659 CpG island CpG island 7117
Tssr134403 15 58823407 to 58823459 52 - TSS region transcription start site region 134403
Tssr134404 15 58823465 to 58823468 3 - TSS region transcription start site region 134404
Tssr134405 15 58823471 to 58823482 11 - TSS region transcription start site region 134405
Tssr134406 15 58823566 to 58823581 15 - TSS region transcription start site region 134406
Tssr134407 15 58823584 to 58823602 18 - TSS region transcription start site region 134407
Tssr134408 15 58823610 to 58823621 11 - TSS region transcription start site region 134408
Tssr134409 15 58823631 to 58823643 12 - TSS region transcription start site region 134409
Tssr131347 15 58823772 to 58823783 11 + TSS region transcription start site region 131347
Tssr131348 15 58823820 to 58823825 5 + TSS region transcription start site region 131348
Ube2d4 15 58846590 to 58847321 731 - protein coding gene ubiquitin-conjugating enzyme E2D 4
Cpgi7118 15 58853254 to 58853539 285 CpG island CpG island 7118
Cpgi7119 15 58872555 to 58873455 900 CpG island CpG island 7119
Tssr131349 15 58872646 to 58872696 50 + TSS region transcription start site region 131349
Trmt12 15 58872649 to 58876781 4132 + protein coding gene tRNA methyltranferase 12
Gm36509 15 58882623 to 58886595 3972 + lncRNA gene predicted gene, 36509
Cpgi7120 15 58888451 to 58889871 1420 CpG island CpG island 7120
Tssr131350 15 58888920 to 58888969 49 + TSS region transcription start site region 131350
Tssr131351 15 58888973 to 58889010 37 + TSS region transcription start site region 131351
Tssr131352 15 58889014 to 58889028 14 + TSS region transcription start site region 131352
Tssr131353 15 58889071 to 58889151 80 + TSS region transcription start site region 131353
Tssr131354 15 58889208 to 58889231 23 + TSS region transcription start site region 131354
Rnf139 15 58889229 to 58902390 13161 + protein coding gene ring finger protein 139
Tssr131355 15 58889269 to 58889311 42 + TSS region transcription start site region 131355
Gm49356 15 58889298 to 58937359 48061 + protein coding gene predicted gene, 49356
Tatdn1 15 58890155 to 58933738 43583 - protein coding gene TatD DNase domain containing 1