Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:58215048-58960087

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7114 15 58213770 to 58215626 1856 CpG island CpG island 7114
Gm15943 15 58214475 to 58324053 109578 + antisense lncRNA gene predicted gene 15943
Tssr131336 15 58245823 to 58245841 18 + TSS region transcription start site region 131336
Gm36193 15 58245922 to 58253360 7438 + lncRNA gene predicted gene, 36193
Klhl38 15 58314573 to 58324169 9596 - protein coding gene kelch-like 38
Tssr134397 15 58324119 to 58324143 24 - TSS region transcription start site region 134397
Tssr134398 15 58324161 to 58324178 17 - TSS region transcription start site region 134398
Anxa13 15 58341471 to 58389244 47773 - protein coding gene annexin A13
Cpgi7115 15 58352576 to 58352933 357 CpG island CpG island 7115
Tssr134399 15 58352728 to 58352749 21 - TSS region transcription start site region 134399
Tssr134400 15 58352843 to 58352860 17 - TSS region transcription start site region 134400
Tssr134401 15 58389263 to 58389280 17 - TSS region transcription start site region 134401
D15Mit61 15 58394138 to 58394234 96 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 61
Gm2675 15 58405824 to 58411326 5502 + lincRNA gene predicted gene 2675
Tssr131337 15 58405830 to 58405845 15 + TSS region transcription start site region 131337
Cpgi7116 15 58414995 to 58416336 1341 CpG island CpG island 7116
Tssr131338 15 58415456 to 58415512 56 + TSS region transcription start site region 131338
Fam91a1 15 58415468 to 58457740 42272 + protein coding gene family with sequence similarity 91, member A1
Tssr131339 15 58415521 to 58415534 13 + TSS region transcription start site region 131339
Tssr131340 15 58432751 to 58432761 10 + TSS region transcription start site region 131340
Tssr131341 15 58449661 to 58449673 12 + TSS region transcription start site region 131341
Tssr131342 15 58510037 to 58510053 16 + TSS region transcription start site region 131342
Tssr131343 15 58528325 to 58528337 12 + TSS region transcription start site region 131343
Fer1l6 15 58542112 to 58665087 122975 + protein coding gene fer-1-like 6 (C. elegans)
Gm23789 15 58565614 to 58565914 300 + unclassified non-coding RNA gene predicted gene, 23789
Gm36451 15 58589003 to 58597096 8093 - lncRNA gene predicted gene, 36451
Tssr131344 15 58648506 to 58648511 5 + TSS region transcription start site region 131344
Tssr131345 15 58648516 to 58648539 23 + TSS region transcription start site region 131345
Gm41329 15 58759887 to 58763828 3941 + lncRNA gene predicted gene, 41329
Gm20712 15 58780461 to 58781951 1490 - sense overlapping lncRNA gene predicted gene 20712
Tmem65 15 58782269 to 58823638 41369 - protein coding gene transmembrane protein 65
Tssr131346 15 58802783 to 58802794 11 + TSS region transcription start site region 131346
Tssr134402 15 58818128 to 58818133 5 - TSS region transcription start site region 134402
Gm24041 15 58819323 to 58819478 155 - snRNA gene predicted gene, 24041
Cpgi7117 15 58822511 to 58824170 1659 CpG island CpG island 7117
Tssr134403 15 58823407 to 58823459 52 - TSS region transcription start site region 134403
Tssr134404 15 58823465 to 58823468 3 - TSS region transcription start site region 134404
Tssr134405 15 58823471 to 58823482 11 - TSS region transcription start site region 134405
Tssr134406 15 58823566 to 58823581 15 - TSS region transcription start site region 134406
Tssr134407 15 58823584 to 58823602 18 - TSS region transcription start site region 134407
Tssr134408 15 58823610 to 58823621 11 - TSS region transcription start site region 134408
Tssr134409 15 58823631 to 58823643 12 - TSS region transcription start site region 134409
Tssr131347 15 58823772 to 58823783 11 + TSS region transcription start site region 131347
Tssr131348 15 58823820 to 58823825 5 + TSS region transcription start site region 131348
Ube2d4 15 58846590 to 58847321 731 - protein coding gene ubiquitin-conjugating enzyme E2D 4
Cpgi7118 15 58853254 to 58853539 285 CpG island CpG island 7118
Cpgi7119 15 58872555 to 58873455 900 CpG island CpG island 7119
Tssr131349 15 58872646 to 58872696 50 + TSS region transcription start site region 131349
Trmt12 15 58872649 to 58876781 4132 + protein coding gene tRNA methyltranferase 12
Gm36509 15 58882623 to 58886595 3972 + lncRNA gene predicted gene, 36509
Cpgi7120 15 58888451 to 58889871 1420 CpG island CpG island 7120
Tssr131350 15 58888920 to 58888969 49 + TSS region transcription start site region 131350
Tssr131351 15 58888973 to 58889010 37 + TSS region transcription start site region 131351
Tssr131352 15 58889014 to 58889028 14 + TSS region transcription start site region 131352
Tssr131353 15 58889071 to 58889151 80 + TSS region transcription start site region 131353
Tssr131354 15 58889208 to 58889231 23 + TSS region transcription start site region 131354
Rnf139 15 58889229 to 58902390 13161 + protein coding gene ring finger protein 139
Tssr131355 15 58889269 to 58889311 42 + TSS region transcription start site region 131355
Gm49356 15 58889298 to 58937359 48061 + protein coding gene predicted gene, 49356
Tatdn1 15 58890155 to 58933738 43583 - protein coding gene TatD DNase domain containing 1
Tssr131356 15 58899566 to 58899584 18 + TSS region transcription start site region 131356
Gm36559 15 58929672 to 58932032 2360 - lncRNA gene predicted gene, 36559
Tssr134410 15 58929837 to 58929840 3 - TSS region transcription start site region 134410
Tssr134411 15 58933309 to 58933344 35 - TSS region transcription start site region 134411
Cpgi7121 15 58933425 to 58934117 692 CpG island CpG island 7121
Tssr134412 15 58933661 to 58933675 14 - TSS region transcription start site region 134412
Tssr134413 15 58933688 to 58933745 57 - TSS region transcription start site region 134413
Tssr131357 15 58933774 to 58933836 62 + TSS region transcription start site region 131357
Ndufb9 15 58933810 to 58939489 5679 + protein coding gene NADH:ubiquinone oxidoreductase subunit B9
Tssr131358 15 58936421 to 58936432 11 + TSS region transcription start site region 131358
Mtss1 15 58941234 to 59082005 140771 - protein coding gene MTSS I-BAR domain containing 1
Tssr134414 15 58942803 to 58942812 9 - TSS region transcription start site region 134414
Tssr134415 15 58956504 to 58956515 11 - TSS region transcription start site region 134415
Tssr134416 15 58956581 to 58956585 4 - TSS region transcription start site region 134416