Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:57983243-58121425

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam83a 15 57985419 to 58011009 25590 + protein coding gene family with sequence similarity 83, member A
Tssr131327 15 57985873 to 57985894 21 + TSS region transcription start site region 131327
Tssr131328 15 58002107 to 58002118 11 + TSS region transcription start site region 131328
Cpgi7109 15 58009492 to 58009745 253 CpG island CpG island 7109
Gm46512 15 58013782 to 58015664 1882 - lncRNA gene predicted gene, 46512
9130401M01Rik 15 58022270 to 58034294 12024 - protein coding gene RIKEN cDNA 9130401M01 gene
Gm29394 15 58028243 to 58076425 48182 - protein coding gene predicted gene 29394
Cpgi7110 15 58033822 to 58034528 706 CpG island CpG island 7110
Tssr131329 15 58033944 to 58033967 23 + TSS region transcription start site region 131329
Tssr131330 15 58033968 to 58033987 19 + TSS region transcription start site region 131330
Tssr134374 15 58034208 to 58034224 16 - TSS region transcription start site region 134374
Tssr134375 15 58034276 to 58034287 11 - TSS region transcription start site region 134375
Tssr134376 15 58034289 to 58034298 9 - TSS region transcription start site region 134376
Tssr134377 15 58034308 to 58034335 27 - TSS region transcription start site region 134377
Tssr134378 15 58034336 to 58034349 13 - TSS region transcription start site region 134378
Tssr131331 15 58040369 to 58040380 11 + TSS region transcription start site region 131331
Gm22299 15 58041516 to 58041651 135 - snoRNA gene predicted gene, 22299
Zhx1 15 58047003 to 58076508 29505 - protein coding gene zinc fingers and homeoboxes 1
Cpgi7111 15 58075542 to 58077326 1784 CpG island CpG island 7111
Tssr134379 15 58076192 to 58076243 51 - TSS region transcription start site region 134379
Tssr134380 15 58076436 to 58076455 19 - TSS region transcription start site region 134380
Tssr134381 15 58076456 to 58076515 59 - TSS region transcription start site region 134381
Atad2 15 58094044 to 58135082 41038 - protein coding gene ATPase family, AAA domain containing 2
Tssr134382 15 58112133 to 58112137 4 - TSS region transcription start site region 134382
Tssr134383 15 58113272 to 58113277 5 - TSS region transcription start site region 134383
Tssr134384 15 58119307 to 58119321 14 - TSS region transcription start site region 134384
Tssr134385 15 58119328 to 58119335 7 - TSS region transcription start site region 134385
Tssr134386 15 58119349 to 58119354 5 - TSS region transcription start site region 134386
Gm7552 15 58121069 to 58122161 1092 + pseudogene predicted gene 7552