Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:56680126-57850150

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Has2 15 56665627 to 56694539 28912 - protein coding gene hyaluronan synthase 2
Has2os 15 56689944 to 56694460 4516 + lncRNA gene hyaluronan synthase 2, opposite strand
Cpgi7103 15 56692777 to 56693514 737 CpG island CpG island 7103
Tssr134359 15 56694509 to 56694523 14 - TSS region transcription start site region 134359
Tssr134360 15 56694525 to 56694554 29 - TSS region transcription start site region 134360
Tssr134361 15 56694579 to 56694603 24 - TSS region transcription start site region 134361
Tssr131308 15 56695483 to 56695485 2 + TSS region transcription start site region 131308
Gm41327 15 56758362 to 56776362 18000 + lncRNA gene predicted gene, 41327
Gm38516 15 56765401 to 56768626 3225 + lncRNA gene predicted gene, 38516
Gm5673 15 56782642 to 56783428 786 - pseudogene predicted gene 5673
Gm2582 15 56880409 to 57006624 126215 - lincRNA gene predicted gene 2582
D15Mit278 15 57168342 to 57168620 278 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-278
Gm26178 15 57239007 to 57239113 106 - snRNA gene predicted gene, 26178
Slc22a22 15 57243767 to 57477625 233858 - protein coding gene solute carrier family 22 (organic cation transporter), member 22
Tssr134362 15 57265126 to 57265150 24 - TSS region transcription start site region 134362
Tssr4597 15 57347684 to 57347695 11 + TSS region transcription start site region 4597
Gm49229 15 57347749 to 57348090 341 + pseudogene predicted gene, 49229
Gm18094 15 57429984 to 57430713 729 + pseudogene predicted gene, 18094
Gm49235 15 57487947 to 57488871 924 - pseudogene predicted gene, 49235
Gm35627 15 57516100 to 57518262 2162 - lncRNA gene predicted gene, 35627
Gm41328 15 57522591 to 57546495 23904 - lncRNA gene predicted gene, 41328
Gm35682 15 57578749 to 57660115 81366 - lncRNA gene predicted gene, 35682
Gm35771 15 57578930 to 57592827 13897 + lncRNA gene predicted gene, 35771
Tssr134363 15 57660051 to 57660058 7 - TSS region transcription start site region 134363
D15Dcr1 15 57684865 to 57684960 95 DNA segment DNA Segment, Chr 15, Derry C. Roopenian 1
Cpgi7104 15 57693090 to 57696301 3211 CpG island CpG island 7104
Tssr134364 15 57693770 to 57693783 13 - TSS region transcription start site region 134364
Tssr131309 15 57694101 to 57694117 16 + TSS region transcription start site region 131309
Tssr131310 15 57694651 to 57694686 35 + TSS region transcription start site region 131310
Zhx2 15 57694667 to 57839832 145165 + protein coding gene zinc fingers and homeoboxes 2
Tssr131311 15 57694761 to 57694777 16 + TSS region transcription start site region 131311
Tssr131312 15 57694790 to 57694837 47 + TSS region transcription start site region 131312
Tssr131313 15 57694839 to 57694849 10 + TSS region transcription start site region 131313
Tssr131314 15 57694860 to 57694870 10 + TSS region transcription start site region 131314
Tssr131315 15 57694914 to 57694979 65 + TSS region transcription start site region 131315
Tssr131316 15 57695217 to 57695221 4 + TSS region transcription start site region 131316
Tssr134365 15 57695340 to 57695376 36 - TSS region transcription start site region 134365
Tssr134366 15 57695544 to 57695560 16 - TSS region transcription start site region 134366
Tssr131317 15 57695662 to 57695685 23 + TSS region transcription start site region 131317
Tssr131318 15 57695690 to 57695702 12 + TSS region transcription start site region 131318
Tssr134367 15 57696094 to 57696115 21 - TSS region transcription start site region 134367
Gm16006 15 57708114 to 57708927 813 - antisense lncRNA gene predicted gene 16006
Tssr134368 15 57708921 to 57708936 15 - TSS region transcription start site region 134368
9330154K18Rik 15 57736563 to 57738666 2103 - antisense lncRNA gene RIKEN cDNA 9330154K18 gene
Tssr134369 15 57772831 to 57772842 11 - TSS region transcription start site region 134369
Tssr131319 15 57777312 to 57777315 3 + TSS region transcription start site region 131319
Tssr131320 15 57839598 to 57839604 6 + TSS region transcription start site region 131320