Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:55456752-55726762

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col14a1 15 55307750 to 55520803 213053 + protein coding gene collagen, type XIV, alpha 1
Tssr131300 15 55457720 to 55457742 22 + TSS region transcription start site region 131300
Gm18787 15 55474780 to 55475563 783 - pseudogene predicted gene, 18787
Gm49257 15 55475530 to 55479377 3847 - unclassified non-coding RNA gene predicted gene, 49257
Gm35470 15 55498421 to 55516153 17732 - lncRNA gene predicted gene, 35470
A430088I17Rik 15 55504841 to 55507503 2662 unclassified gene RIKEN cDNA A430088I17 gene
Mrpl13 15 55534095 to 55557312 23217 - protein coding gene mitochondrial ribosomal protein L13
Cpgi7101 15 55557061 to 55557913 852 CpG island CpG island 7101
Tssr134342 15 55557296 to 55557332 36 - TSS region transcription start site region 134342
Tssr134343 15 55557343 to 55557354 11 - TSS region transcription start site region 134343
Tssr131301 15 55557399 to 55557436 37 + TSS region transcription start site region 131301
Mtbp 15 55557408 to 55626423 69015 + protein coding gene Mdm2, transformed 3T3 cell double minute p53 binding protein
Tssr131302 15 55557554 to 55557574 20 + TSS region transcription start site region 131302
Tssr131303 15 55557575 to 55557604 29 + TSS region transcription start site region 131303
Tssr131304 15 55557624 to 55557635 11 + TSS region transcription start site region 131304
Tssr131305 15 55591752 to 55591762 10 + TSS region transcription start site region 131305
Tssr131306 15 55591773 to 55591791 18 + TSS region transcription start site region 131306
1110059G02Rik 15 55636389 to 55637191 802 unclassified gene RIKEN cDNA 1110059G02 gene
Tssr134344 15 55636804 to 55636808 4 - TSS region transcription start site region 134344
Sntb1 15 55638505 to 55907304 268799 - protein coding gene syntrophin, basic 1
Tssr134345 15 55638692 to 55638712 20 - TSS region transcription start site region 134345
5530400N10Rik 15 55688610 to 55690224 1614 unclassified gene RIKEN cDNA 5530400N10 gene