Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:5519961-6550820

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
5430437J10Rik 15 5496318 to 5594983 98665 + lincRNA gene RIKEN cDNA 5430437J10 gene
Tssr130453 15 5539556 to 5539562 6 + TSS region transcription start site region 130453
Tssr130454 15 5554747 to 5554756 9 + TSS region transcription start site region 130454
Gm20957 15 5580228 to 5580848 620 + pseudogene predicted gene, 20957
Gm41258 15 5675642 to 5704521 28879 + lncRNA gene predicted gene, 41258
Gm18715 15 5714034 to 5714303 269 + pseudogene predicted gene, 18715
Gm27760 15 5864306 to 5864419 113 + miRNA gene predicted gene, 27760
Gm8043 15 5866235 to 5867093 858 + pseudogene predicted gene 8043
Gm49095 15 5951444 to 5952359 915 + pseudogene predicted gene, 49095
Gm41259 15 6025192 to 6044779 19587 - lncRNA gene predicted gene, 41259
Gm8047 15 6034961 to 6035820 859 + pseudogene predicted gene 8047
Gm23139 15 6151217 to 6151348 131 - snoRNA gene predicted gene, 23139
Tssr130455 15 6299781 to 6299795 14 + TSS region transcription start site region 130455
Dab2 15 6299788 to 6440712 140924 + protein coding gene disabled 2, mitogen-responsive phosphoprotein
Tssr130456 15 6299797 to 6299851 54 + TSS region transcription start site region 130456
Tssr130457 15 6299857 to 6299868 11 + TSS region transcription start site region 130457
Tssr130458 15 6301308 to 6301319 11 + TSS region transcription start site region 130458
Gm16311 15 6303244 to 6309913 6669 - antisense lncRNA gene predicted gene 16311
Gm18888 15 6329240 to 6329876 636 - pseudogene predicted gene, 18888
Tssr130459 15 6380615 to 6380624 9 + TSS region transcription start site region 130459
Cpgi6920 15 6386264 to 6386956 692 CpG island CpG island 6920
Tssr130460 15 6386670 to 6386681 11 + TSS region transcription start site region 130460
Tssr130461 15 6386759 to 6386785 26 + TSS region transcription start site region 130461
Tssr130462 15 6386860 to 6386874 14 + TSS region transcription start site region 130462
Tssr130463 15 6387068 to 6387071 3 + TSS region transcription start site region 130463
Tssr130464 15 6391420 to 6391460 40 + TSS region transcription start site region 130464
Tssr130465 15 6392499 to 6392505 6 + TSS region transcription start site region 130465
Tssr130466 15 6407960 to 6407968 8 + TSS region transcription start site region 130466
Tssr130467 15 6417478 to 6417482 4 + TSS region transcription start site region 130467
Tssr130468 15 6422301 to 6422327 26 + TSS region transcription start site region 130468
Tssr130469 15 6424201 to 6424212 11 + TSS region transcription start site region 130469
Tssr130470 15 6424660 to 6424664 4 + TSS region transcription start site region 130470
Tssr130471 15 6428677 to 6428688 11 + TSS region transcription start site region 130471
Tssr130472 15 6429435 to 6429463 28 + TSS region transcription start site region 130472
Tssr130473 15 6429465 to 6429481 16 + TSS region transcription start site region 130473
Tssr130474 15 6429685 to 6429708 23 + TSS region transcription start site region 130474
Tssr130475 15 6429765 to 6429776 11 + TSS region transcription start site region 130475
Tssr130476 15 6429795 to 6429813 18 + TSS region transcription start site region 130476
Tssr133619 15 6429902 to 6429949 47 - TSS region transcription start site region 133619
Tssr130477 15 6431061 to 6431078 17 + TSS region transcription start site region 130477
Tssr130478 15 6435161 to 6435190 29 + TSS region transcription start site region 130478
Tssr133620 15 6435195 to 6435239 44 - TSS region transcription start site region 133620
Tssr130479 15 6435200 to 6435214 14 + TSS region transcription start site region 130479
Tssr130480 15 6435267 to 6435302 35 + TSS region transcription start site region 130480
Tssr130481 15 6435306 to 6435361 55 + TSS region transcription start site region 130481
Tssr133621 15 6435332 to 6435355 23 - TSS region transcription start site region 133621
Tssr130482 15 6435389 to 6435412 23 + TSS region transcription start site region 130482
Tssr130483 15 6435421 to 6435432 11 + TSS region transcription start site region 130483
Tssr130484 15 6435439 to 6435449 10 + TSS region transcription start site region 130484
Tssr130485 15 6435509 to 6435537 28 + TSS region transcription start site region 130485
Tssr130486 15 6435674 to 6435683 9 + TSS region transcription start site region 130486
Tssr130487 15 6438244 to 6438269 25 + TSS region transcription start site region 130487
Tssr130488 15 6438942 to 6438966 24 + TSS region transcription start site region 130488
Tssr130489 15 6438992 to 6439003 11 + TSS region transcription start site region 130489
Tssr130490 15 6439195 to 6439207 12 + TSS region transcription start site region 130490
Tssr130491 15 6439228 to 6439240 12 + TSS region transcription start site region 130491
Tssr130492 15 6439330 to 6439348 18 + TSS region transcription start site region 130492
Tssr130493 15 6445320 to 6445353 33 + TSS region transcription start site region 130493
C9 15 6445333 to 6498476 53143 + protein coding gene complement component 9
Tssr130494 15 6445363 to 6445376 13 + TSS region transcription start site region 130494
Gm23218 15 6500697 to 6500972 275 + unclassified non-coding RNA gene predicted gene, 23218
Tssr130495 15 6522789 to 6522867 78 + TSS region transcription start site region 130495
Fyb 15 6522853 to 6663313 140460 + protein coding gene FYN binding protein
Tssr130496 15 6540258 to 6540270 12 + TSS region transcription start site region 130496
Tssr130497 15 6540292 to 6540312 20 + TSS region transcription start site region 130497
Tssr130498 15 6540313 to 6540329 16 + TSS region transcription start site region 130498
Tssr130499 15 6540346 to 6540353 7 + TSS region transcription start site region 130499
Tssr130500 15 6547468 to 6547493 25 + TSS region transcription start site region 130500