Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:54960131-55127152

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26684 15 54952070 to 54964642 12572 + bidirectional promoter lncRNA gene predicted gene, 26684
4930478E11Rik 15 54981333 to 54986891 5558 - lincRNA gene RIKEN cDNA 4930478E11 gene
Gm2491 15 54982171 to 54986891 4720 - unclassified gene predicted gene 2491
Gm49036 15 54986583 to 54987097 514 + pseudogene predicted gene, 49036
Tssr134336 15 54986857 to 54986868 11 - TSS region transcription start site region 134336
Taf2 15 55015131 to 55072152 57021 - protein coding gene TATA-box binding protein associated factor 2
Tssr134337 15 55023149 to 55023153 4 - TSS region transcription start site region 134337
Cpgi7096 15 55071749 to 55072416 667 CpG island CpG island 7096
Tssr134338 15 55072139 to 55072161 22 - TSS region transcription start site region 134338
Tssr134339 15 55072169 to 55072177 8 - TSS region transcription start site region 134339
Dscc1 15 55076099 to 55090491 14392 - protein coding gene DNA replication and sister chromatid cohesion 1
Tssr134340 15 55084096 to 55084111 15 - TSS region transcription start site region 134340
Gm41325 15 55084561 to 55097699 13138 + antisense lncRNA gene predicted gene, 41325
Cpgi7097 15 55090015 to 55090883 868 CpG island CpG island 7097
Tssr134341 15 55090422 to 55090496 74 - TSS region transcription start site region 134341
Gm9920 15 55099917 to 55113582 13665 - lncRNA gene predicted gene 9920
Cpgi7098 15 55112256 to 55113123 867 CpG island CpG island 7098
Deptor 15 55112317 to 55259271 146954 + protein coding gene DEP domain containing MTOR-interacting protein
Tssr131287 15 55112331 to 55112346 15 + TSS region transcription start site region 131287
Tssr131288 15 55112360 to 55112403 43 + TSS region transcription start site region 131288
Tssr131289 15 55112420 to 55112451 31 + TSS region transcription start site region 131289
Tssr131290 15 55112452 to 55112484 32 + TSS region transcription start site region 131290