Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:53313810-54042537

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ext1 15 53068261 to 53346183 277922 - protein coding gene exostoses (multiple) 1
Tssr134305 15 53327103 to 53327107 4 - TSS region transcription start site region 134305
Tssr134306 15 53327370 to 53327384 14 - TSS region transcription start site region 134306
Tssr134307 15 53331934 to 53331938 4 - TSS region transcription start site region 134307
Cpgi7089 15 53344913 to 53346842 1929 CpG island CpG island 7089
Tssr134308 15 53345767 to 53345784 17 - TSS region transcription start site region 134308
Tssr134309 15 53346096 to 53346110 14 - TSS region transcription start site region 134309
Tssr134310 15 53346118 to 53346169 51 - TSS region transcription start site region 134310
Tssr134311 15 53346175 to 53346206 31 - TSS region transcription start site region 134311
Gm27926 15 53383919 to 53383984 65 + snRNA gene predicted gene, 27926
Samd12 15 53453810 to 53902537 448727 - protein coding gene sterile alpha motif domain containing 12
Gm23200 15 53613067 to 53613198 131 - snoRNA gene predicted gene, 23200
Mir28c 15 53614205 to 53614279 74 - miRNA gene microRNA 28c
Tssr131262 15 53621649 to 53621659 10 + TSS region transcription start site region 131262
1700015H07Rik 15 53621655 to 53623270 1615 + antisense lncRNA gene RIKEN cDNA 1700015H07 gene
Tssr131263 15 53639108 to 53639113 5 + TSS region transcription start site region 131263
Gm7489 15 53884906 to 53886597 1691 + protein coding gene predicted gene 7489
Cpgi7090 15 53902063 to 53902776 713 CpG island CpG island 7090
Tssr134312 15 53902393 to 53902450 57 - TSS region transcription start site region 134312
Tssr134313 15 53902472 to 53902515 43 - TSS region transcription start site region 134313
Gm26933 15 54034506 to 54035982 1476 - pseudogene predicted gene, 26933