Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:53048810-54307537

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ext1 15 53068261 to 53346183 277922 - protein coding gene exostoses (multiple) 1
Tssr134298 15 53068560 to 53068582 22 - TSS region transcription start site region 134298
D15Mit232 15 53112510 to 53112623 113 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 232
Cdif 15 53112510 to 53112623 113 QTL color difference
Tssr134299 15 53151923 to 53151927 4 - TSS region transcription start site region 134299
Tssr134300 15 53189098 to 53189101 3 - TSS region transcription start site region 134300
Tssr4596 15 53194157 to 53194158 1 + TSS region transcription start site region 4596
Tssr134301 15 53258158 to 53258161 3 - TSS region transcription start site region 134301
D15Mit25 15 53259225 to 53259358 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 25
Tssr134302 15 53266944 to 53266960 16 - TSS region transcription start site region 134302
Tssr134303 15 53277903 to 53277925 22 - TSS region transcription start site region 134303
Tssr134304 15 53303402 to 53303405 3 - TSS region transcription start site region 134304
D15Wsu126e 15 53308785 to 53309034 249 DNA segment DNA segment, Chr 15, Wayne State University 126, expressed
Tssr134305 15 53327103 to 53327107 4 - TSS region transcription start site region 134305
Tssr134306 15 53327370 to 53327384 14 - TSS region transcription start site region 134306
Tssr134307 15 53331934 to 53331938 4 - TSS region transcription start site region 134307
Cpgi7089 15 53344913 to 53346842 1929 CpG island CpG island 7089
Tssr134308 15 53345767 to 53345784 17 - TSS region transcription start site region 134308
Tssr134309 15 53346096 to 53346110 14 - TSS region transcription start site region 134309
Tssr134310 15 53346118 to 53346169 51 - TSS region transcription start site region 134310
Tssr134311 15 53346175 to 53346206 31 - TSS region transcription start site region 134311
Gm27926 15 53383919 to 53383984 65 + snRNA gene predicted gene, 27926
Samd12 15 53453810 to 53902537 448727 - protein coding gene sterile alpha motif domain containing 12
Gm23200 15 53613067 to 53613198 131 - snoRNA gene predicted gene, 23200
Mir28c 15 53614205 to 53614279 74 - miRNA gene microRNA 28c
Tssr131262 15 53621649 to 53621659 10 + TSS region transcription start site region 131262
1700015H07Rik 15 53621655 to 53623270 1615 + antisense lncRNA gene RIKEN cDNA 1700015H07 gene
Tssr131263 15 53639108 to 53639113 5 + TSS region transcription start site region 131263
Gm7489 15 53884906 to 53886597 1691 + protein coding gene predicted gene 7489
Cpgi7090 15 53902063 to 53902776 713 CpG island CpG island 7090
Tssr134312 15 53902393 to 53902450 57 - TSS region transcription start site region 134312
Tssr134313 15 53902472 to 53902515 43 - TSS region transcription start site region 134313
Gm26933 15 54034506 to 54035982 1476 - pseudogene predicted gene, 26933
D15Mit269 15 54246546 to 54246660 114 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 269
Tnfrsf11b 15 54250619 to 54278484 27865 - protein coding gene tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
Tssr134314 15 54278295 to 54278312 17 - TSS region transcription start site region 134314
Tssr134315 15 54278420 to 54278433 13 - TSS region transcription start site region 134315
Tssr134316 15 54278597 to 54278630 33 - TSS region transcription start site region 134316
Tssr134317 15 54278650 to 54278679 29 - TSS region transcription start site region 134317
Gm7566 15 54304565 to 54305134 569 - pseudogene predicted gene 7566