Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:52217707-53443559

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr131252 15 52241404 to 52241408 4 + TSS region transcription start site region 131252
Gm7543 15 52259123 to 52259691 568 + pseudogene predicted gene 7543
Tssr131253 15 52295509 to 52295545 36 + TSS region transcription start site region 131253
Slc30a8 15 52295553 to 52335733 40180 + protein coding gene solute carrier family 30 (zinc transporter), member 8
Tssr131254 15 52295642 to 52295654 12 + TSS region transcription start site region 131254
Tssr4595 15 52387146 to 52387150 4 + TSS region transcription start site region 4595
Gm41321 15 52439183 to 52443971 4788 - lncRNA gene predicted gene, 41321
Gm41322 15 52445122 to 52449761 4639 + lincRNA gene predicted gene, 41322
Gm10020 15 52477617 to 52478228 611 - pseudogene predicted pseudogene 10020
Cpgi7087 15 52478225 to 52478388 163 CpG island CpG island 7087
Tssr134295 15 52478351 to 52478381 30 - TSS region transcription start site region 134295
Gm23545 15 52496885 to 52496988 103 + snRNA gene predicted gene, 23545
Gm23267 15 52499656 to 52499787 131 + snoRNA gene predicted gene, 23267
Cpgi7088 15 52712258 to 52713053 795 CpG island CpG island 7088
Tssr131255 15 52712379 to 52712384 5 + TSS region transcription start site region 131255
Tssr131256 15 52712387 to 52712394 7 + TSS region transcription start site region 131256
Tssr131257 15 52712401 to 52712429 28 + TSS region transcription start site region 131257
Tssr131258 15 52712434 to 52712477 43 + TSS region transcription start site region 131258
Med30 15 52712445 to 52730431 17986 + protein coding gene mediator complex subunit 30
Tssr131259 15 52712482 to 52712491 9 + TSS region transcription start site region 131259
Gm41323 15 52727707 to 52933559 205852 - lncRNA gene predicted gene, 41323
Tssr134296 15 52753418 to 52753456 38 - TSS region transcription start site region 134296
Gm34794 15 52783663 to 52786250 2587 - lincRNA gene predicted gene, 34794
Tssr134297 15 52786222 to 52786232 10 - TSS region transcription start site region 134297
Tssr131260 15 52959040 to 52959067 27 + TSS region transcription start site region 131260
Tssr131261 15 52959316 to 52959321 5 + TSS region transcription start site region 131261
Ext1 15 53068261 to 53346183 277922 - protein coding gene exostoses (multiple) 1
Tssr134298 15 53068560 to 53068582 22 - TSS region transcription start site region 134298
Cdif 15 53112510 to 53112623 113 QTL color difference
D15Mit232 15 53112510 to 53112623 113 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 232
Tssr134299 15 53151923 to 53151927 4 - TSS region transcription start site region 134299
Tssr134300 15 53189098 to 53189101 3 - TSS region transcription start site region 134300
Tssr4596 15 53194157 to 53194158 1 + TSS region transcription start site region 4596
Tssr134301 15 53258158 to 53258161 3 - TSS region transcription start site region 134301
D15Mit25 15 53259225 to 53259358 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 25
Tssr134302 15 53266944 to 53266960 16 - TSS region transcription start site region 134302
Tssr134303 15 53277903 to 53277925 22 - TSS region transcription start site region 134303
Tssr134304 15 53303402 to 53303405 3 - TSS region transcription start site region 134304
D15Wsu126e 15 53308785 to 53309034 249 DNA segment DNA segment, Chr 15, Wayne State University 126, expressed
Tssr134305 15 53327103 to 53327107 4 - TSS region transcription start site region 134305
Tssr134306 15 53327370 to 53327384 14 - TSS region transcription start site region 134306
Tssr134307 15 53331934 to 53331938 4 - TSS region transcription start site region 134307
Cpgi7089 15 53344913 to 53346842 1929 CpG island CpG island 7089
Tssr134308 15 53345767 to 53345784 17 - TSS region transcription start site region 134308
Tssr134309 15 53346096 to 53346110 14 - TSS region transcription start site region 134309
Tssr134310 15 53346118 to 53346169 51 - TSS region transcription start site region 134310
Tssr134311 15 53346175 to 53346206 31 - TSS region transcription start site region 134311
Gm27926 15 53383919 to 53383984 65 + snRNA gene predicted gene, 27926