MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:5179861-5290091

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prkaa1	15	5143861 to 5181899	38038	+	protein coding gene	protein kinase, AMP-activated, alpha 1 catalytic subunit
Gm15938	15	5175085 to 5185723	10638	-	antisense lncRNA gene	predicted gene 15938
Tssr130445	15	5185519 to 5185552	33	+	TSS region	transcription start site region 130445
Ttc33	15	5185525 to 5218336	32811	+	protein coding gene	tetratricopeptide repeat domain 33
Cpgi6916	15	5185653 to 5186237	584		CpG island	CpG island 6916
Tssr130446	15	5185700 to 5185742	42	+	TSS region	transcription start site region 130446
Gm15937	15	5209280 to 5210216	936	+	pseudogene	predicted gene 15937
Ptger4	15	5233399 to 5244187	10788	-	protein coding gene	prostaglandin E receptor 4 (subtype EP4)
Cpgi6917	15	5234861 to 5235091	230		CpG island	CpG island 6917
Tssr130447	15	5237465 to 5237476	11	+	TSS region	transcription start site region 130447
Tssr130448	15	5237479 to 5237496	17	+	TSS region	transcription start site region 130448
Tssr130449	15	5237513 to 5237524	11	+	TSS region	transcription start site region 130449
Tssr130450	15	5242099 to 5242123	24	+	TSS region	transcription start site region 130450
Cpgi6918	15	5242118 to 5243306	1188		CpG island	CpG island 6918
Cpgi6919	15	5243576 to 5244875	1299		CpG island	CpG island 6919
Tssr133617	15	5244164 to 5244175	11	-	TSS region	transcription start site region 133617
Tssr133618	15	5244178 to 5244192	14	-	TSS region	transcription start site region 133618
Gm41257	15	5254639 to 5327713	73074	+	lncRNA gene	predicted gene, 41257
Gm49093	15	5280946 to 5281350	404	+	pseudogene	predicted gene, 49093