Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:51787087-52009767

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eif3h 15 51786563 to 51865461 78898 - protein coding gene eukaryotic translation initiation factor 3, subunit H
Tssr134284 15 51790250 to 51790268 18 - TSS region transcription start site region 134284
Tssr134285 15 51790279 to 51790297 18 - TSS region transcription start site region 134285
Cpgi7083 15 51865034 to 51865687 653 CpG island CpG island 7083
Tssr134286 15 51865448 to 51865474 26 - TSS region transcription start site region 134286
Tssr134287 15 51865498 to 51865517 19 - TSS region transcription start site region 134287
Cpgi7084 15 51877183 to 51877814 631 CpG island CpG island 7084
Tssr131245 15 51877439 to 51877506 67 + TSS region transcription start site region 131245
Utp23 15 51877441 to 51884622 7181 + protein coding gene UTP23 small subunit processome component
Tssr131246 15 51877509 to 51877520 11 + TSS region transcription start site region 131246
Tssr131247 15 51877742 to 51877746 4 + TSS region transcription start site region 131247
Gm34678 15 51880373 to 51897041 16668 - antisense lncRNA gene predicted gene, 34678
Tssr134288 15 51897004 to 51897028 24 - TSS region transcription start site region 134288
Tssr134289 15 51897032 to 51897042 10 - TSS region transcription start site region 134289
Gm48923 15 51897087 to 51899767 2680 + lincRNA gene predicted gene, 48923
Rad21 15 51962240 to 51991747 29507 - protein coding gene RAD21 cohesin complex component
Tssr134290 15 51967841 to 51967862 21 - TSS region transcription start site region 134290
Tssr134291 15 51978124 to 51978139 15 - TSS region transcription start site region 134291
Cpgi7085 15 51990774 to 51992006 1232 CpG island CpG island 7085
Tssr134292 15 51991679 to 51991752 73 - TSS region transcription start site region 134292
Tssr134293 15 51991767 to 51991778 11 - TSS region transcription start site region 134293
Tssr134294 15 52000080 to 52000129 49 - TSS region transcription start site region 134294