Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:51297872-52245037

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm19303 15 51231640 to 51395610 163970 - lincRNA gene predicted gene, 19303
Gm2361 15 51548357 to 51548970 613 - pseudogene predicted gene 2361
Gm34503 15 51577909 to 51591810 13901 - lncRNA gene predicted gene, 34503
Gm34562 15 51601772 to 51629635 27863 - lincRNA gene predicted gene, 34562
Tssr134283 15 51652546 to 51652575 29 - TSS region transcription start site region 134283
Tssr131244 15 51713641 to 51713659 18 + TSS region transcription start site region 131244
Gm41320 15 51767872 to 51775037 7165 - lncRNA gene predicted gene, 41320
Eif3h 15 51786563 to 51865461 78898 - protein coding gene eukaryotic translation initiation factor 3, subunit H
Tssr134284 15 51790250 to 51790268 18 - TSS region transcription start site region 134284
Tssr134285 15 51790279 to 51790297 18 - TSS region transcription start site region 134285
Cpgi7083 15 51865034 to 51865687 653 CpG island CpG island 7083
Tssr134286 15 51865448 to 51865474 26 - TSS region transcription start site region 134286
Tssr134287 15 51865498 to 51865517 19 - TSS region transcription start site region 134287
Cpgi7084 15 51877183 to 51877814 631 CpG island CpG island 7084
Tssr131245 15 51877439 to 51877506 67 + TSS region transcription start site region 131245
Utp23 15 51877441 to 51884622 7181 + protein coding gene UTP23 small subunit processome component
Tssr131246 15 51877509 to 51877520 11 + TSS region transcription start site region 131246
Tssr131247 15 51877742 to 51877746 4 + TSS region transcription start site region 131247
Gm34678 15 51880373 to 51897041 16668 - antisense lncRNA gene predicted gene, 34678
Tssr134288 15 51897004 to 51897028 24 - TSS region transcription start site region 134288
Tssr134289 15 51897032 to 51897042 10 - TSS region transcription start site region 134289
Gm48923 15 51897087 to 51899767 2680 + lincRNA gene predicted gene, 48923
Rad21 15 51962240 to 51991747 29507 - protein coding gene RAD21 cohesin complex component
Tssr134290 15 51967841 to 51967862 21 - TSS region transcription start site region 134290
Tssr134291 15 51978124 to 51978139 15 - TSS region transcription start site region 134291
Cpgi7085 15 51990774 to 51992006 1232 CpG island CpG island 7085
Tssr134292 15 51991679 to 51991752 73 - TSS region transcription start site region 134292
Tssr134293 15 51991767 to 51991778 11 - TSS region transcription start site region 134293
Tssr134294 15 52000080 to 52000129 49 - TSS region transcription start site region 134294
Gm48926 15 52013284 to 52013464 180 + pseudogene predicted gene, 48926
Gm19236 15 52033368 to 52035638 2270 + pseudogene predicted gene, 19236
Cpgi7086 15 52039851 to 52040780 929 CpG island CpG island 7086
Tssr131248 15 52039955 to 52039965 10 + TSS region transcription start site region 131248
Aard 15 52040107 to 52045722 5615 + protein coding gene alanine and arginine rich domain containing protein
Tssr131249 15 52040147 to 52040161 14 + TSS region transcription start site region 131249
Tssr131250 15 52040395 to 52040406 11 + TSS region transcription start site region 131250
Tssr131251 15 52044888 to 52044892 4 + TSS region transcription start site region 131251
Gm2387 15 52089308 to 52089953 645 + pseudogene predicted gene 2387
D15Mit143 15 52153859 to 52153986 127 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 143
D15Mit221 15 52157122 to 52157245 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 221
Tssr131252 15 52241404 to 52241408 4 + TSS region transcription start site region 131252