Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:5075085-5285723

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16077 15 5092547 to 5093201 654 + pseudogene predicted gene 16077
Card6 15 5095981 to 5108539 12558 - protein coding gene caspase recruitment domain family, member 6
Tssr133606 15 5098913 to 5098934 21 - TSS region transcription start site region 133606
Tssr133607 15 5099125 to 5099155 30 - TSS region transcription start site region 133607
Tssr133608 15 5108173 to 5108196 23 - TSS region transcription start site region 133608
Tssr133609 15 5108367 to 5108374 7 - TSS region transcription start site region 133609
Tssr133610 15 5108381 to 5108405 24 - TSS region transcription start site region 133610
Tssr133611 15 5108424 to 5108433 9 - TSS region transcription start site region 133611
Tssr133612 15 5108445 to 5108459 14 - TSS region transcription start site region 133612
Tssr133613 15 5108469 to 5108490 21 - TSS region transcription start site region 133613
Tssr133614 15 5108492 to 5108565 73 - TSS region transcription start site region 133614
Cpgi6914 15 5116064 to 5117274 1210 CpG island CpG island 6914
Tssr133615 15 5116351 to 5116365 14 - TSS region transcription start site region 133615
Tssr130440 15 5116589 to 5116629 40 + TSS region transcription start site region 130440
Tssr130441 15 5116634 to 5116678 44 + TSS region transcription start site region 130441
Rpl37 15 5116645 to 5119140 2495 + protein coding gene ribosomal protein L37
Snord72 15 5118421 to 5118480 59 + snoRNA gene small nucleolar RNA, C/D box 72
Gm10250 15 5120654 to 5121135 481 - pseudogene predicted pseudogene 10250
Tssr133616 15 5121174 to 5121194 20 - TSS region transcription start site region 133616
Gm41256 15 5134031 to 5135280 1249 - lncRNA gene predicted gene, 41256
Cpgi6915 15 5143392 to 5144551 1159 CpG island CpG island 6915
Prkaa1 15 5143861 to 5181899 38038 + protein coding gene protein kinase, AMP-activated, alpha 1 catalytic subunit
Tssr130442 15 5143861 to 5143896 35 + TSS region transcription start site region 130442
Tssr130443 15 5153152 to 5153156 4 + TSS region transcription start site region 130443
Gm15938 15 5175085 to 5185723 10638 - antisense lncRNA gene predicted gene 15938
Tssr130444 15 5179748 to 5179765 17 + TSS region transcription start site region 130444
Tssr130445 15 5185519 to 5185552 33 + TSS region transcription start site region 130445
Ttc33 15 5185525 to 5218336 32811 + protein coding gene tetratricopeptide repeat domain 33
Cpgi6916 15 5185653 to 5186237 584 CpG island CpG island 6916
Tssr130446 15 5185700 to 5185742 42 + TSS region transcription start site region 130446
Gm15937 15 5209280 to 5210216 936 + pseudogene predicted gene 15937
Ptger4 15 5233399 to 5244187 10788 - protein coding gene prostaglandin E receptor 4 (subtype EP4)
Cpgi6917 15 5234861 to 5235091 230 CpG island CpG island 6917
Tssr130447 15 5237465 to 5237476 11 + TSS region transcription start site region 130447
Tssr130448 15 5237479 to 5237496 17 + TSS region transcription start site region 130448
Tssr130449 15 5237513 to 5237524 11 + TSS region transcription start site region 130449
Tssr130450 15 5242099 to 5242123 24 + TSS region transcription start site region 130450
Cpgi6918 15 5242118 to 5243306 1188 CpG island CpG island 6918
Cpgi6919 15 5243576 to 5244875 1299 CpG island CpG island 6919
Tssr133617 15 5244164 to 5244175 11 - TSS region transcription start site region 133617
Tssr133618 15 5244178 to 5244192 14 - TSS region transcription start site region 133618
Gm41257 15 5254639 to 5327713 73074 + lncRNA gene predicted gene, 41257
Gm49093 15 5280946 to 5281350 404 + pseudogene predicted gene, 49093