Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:45485406-47685519

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr4591 15 45583507 to 45583510 3 + TSS region transcription start site region 4591
D15Mit86 15 45616018 to 45616188 170 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 86
Tssr134216 15 45632374 to 45632417 43 - TSS region transcription start site region 134216
Gm2203 15 45962526 to 45963459 933 + pseudogene predicted gene 2203
Gm5472 15 45978360 to 45980037 1677 - pseudogene predicted gene 5472
Gm26063 15 46151698 to 46151804 106 - snRNA gene predicted gene, 26063
Gm49075 15 46178349 to 46178760 411 - pseudogene predicted gene, 49075
Gm41317 15 46226899 to 46324786 97887 - lncRNA gene predicted gene, 41317
Tssr131236 15 46324569 to 46324577 8 + TSS region transcription start site region 131236
Tssr131237 15 46324580 to 46324587 7 + TSS region transcription start site region 131237
1700022A22Rik 15 46324585 to 46373899 49314 + lincRNA gene RIKEN cDNA 1700022A22 gene
Tssr131238 15 46324591 to 46324602 11 + TSS region transcription start site region 131238
Gm23562 15 46434808 to 46434869 61 - miRNA gene predicted gene, 23562
4930523O13Rik 15 46435866 to 46496179 60313 - lincRNA gene RIKEN cDNA 4930523O13 gene
Gm49079 15 46438532 to 46438958 426 + pseudogene predicted gene, 49079
Tssr134217 15 46496152 to 46496161 9 - TSS region transcription start site region 134217
Tssr134218 15 46496162 to 46496187 25 - TSS region transcription start site region 134218
D15Mit58.1 15 46585406 to 46585519 113 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 58.1
D15Mit58 15 46585484 to 46585622 138 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 58
4930548G14Rik 15 46623305 to 46639858 16553 + lincRNA gene RIKEN cDNA 4930548G14 gene
Tssr131239 15 46623358 to 46623367 9 + TSS region transcription start site region 131239
Gm38541 15 46939070 to 46939886 816 + pseudogene predicted gene, 38541
Gm23665 15 46944387 to 46944448 61 - snRNA gene predicted gene, 23665
Gm7508 15 47421915 to 47422423 508 + pseudogene predicted gene 7508
Gm2267 15 47520351 to 47522638 2287 + pseudogene predicted gene 2267
Tssr131240 15 47520693 to 47520701 8 + TSS region transcription start site region 131240
Tssr131241 15 47539982 to 47539994 12 + TSS region transcription start site region 131241
Csmd3 15 47580637 to 48792063 1211426 - protein coding gene CUB and Sushi multiple domains 3