Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:45227417-51125548

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128 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cocia16 15 33497411 to 45277417 11780006 QTL cocaine induced activation 16
Lfibq26 15 45277417 to 51075548 5798131 QTL liver fibrosis QTL 26
Bsbob5 15 45419250 to 45419343 93 QTL BSB obesity 5
Bpq6 15 45419250 to 45419343 93 QTL blood pressure QTL 6
D15Mit152 15 45419250 to 45419343 93 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 152
Tssr4591 15 45583507 to 45583510 3 + TSS region transcription start site region 4591
D15Mit86 15 45616018 to 45616188 170 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 86
Tssr134216 15 45632374 to 45632417 43 - TSS region transcription start site region 134216
Gm2203 15 45962526 to 45963459 933 + pseudogene predicted gene 2203
Gm5472 15 45978360 to 45980037 1677 - pseudogene predicted gene 5472
Gm26063 15 46151698 to 46151804 106 - snRNA gene predicted gene, 26063
Gm49075 15 46178349 to 46178760 411 - pseudogene predicted gene, 49075
Gm41317 15 46226899 to 46324786 97887 - lncRNA gene predicted gene, 41317
Tssr131236 15 46324569 to 46324577 8 + TSS region transcription start site region 131236
Tssr131237 15 46324580 to 46324587 7 + TSS region transcription start site region 131237
1700022A22Rik 15 46324585 to 46373899 49314 + lincRNA gene RIKEN cDNA 1700022A22 gene
Tssr131238 15 46324591 to 46324602 11 + TSS region transcription start site region 131238
Gm23562 15 46434808 to 46434869 61 - miRNA gene predicted gene, 23562
4930523O13Rik 15 46435866 to 46496179 60313 - lincRNA gene RIKEN cDNA 4930523O13 gene
Gm49079 15 46438532 to 46438958 426 + pseudogene predicted gene, 49079
Tssr134217 15 46496152 to 46496161 9 - TSS region transcription start site region 134217
Tssr134218 15 46496162 to 46496187 25 - TSS region transcription start site region 134218
D15Mit58.1 15 46585406 to 46585519 113 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 58.1
D15Mit58 15 46585484 to 46585622 138 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 58
4930548G14Rik 15 46623305 to 46639858 16553 + lincRNA gene RIKEN cDNA 4930548G14 gene
Tssr131239 15 46623358 to 46623367 9 + TSS region transcription start site region 131239
Gm38541 15 46939070 to 46939886 816 + pseudogene predicted gene, 38541
Gm23665 15 46944387 to 46944448 61 - snRNA gene predicted gene, 23665
Gm7508 15 47421915 to 47422423 508 + pseudogene predicted gene 7508
Gm2267 15 47520351 to 47522638 2287 + pseudogene predicted gene 2267
Tssr131240 15 47520693 to 47520701 8 + TSS region transcription start site region 131240
Tssr131241 15 47539982 to 47539994 12 + TSS region transcription start site region 131241
Csmd3 15 47580637 to 48792063 1211426 - protein coding gene CUB and Sushi multiple domains 3
Gm16300 15 47699714 to 47703827 4113 - pseudogene predicted gene 16300
Gm23530 15 47800673 to 47800809 136 + snoRNA gene predicted gene, 23530
Gm18742 15 48163470 to 48164789 1319 + pseudogene predicted gene, 18742
Gm25007 15 48551308 to 48551440 132 + snRNA gene predicted gene, 25007
Tssr131242 15 48782815 to 48782819 4 + TSS region transcription start site region 131242
Cpgi7079 15 48789684 to 48790211 527 CpG island CpG island 7079
Tssr134219 15 48791983 to 48791998 15 - TSS region transcription start site region 134219
Tssr134220 15 48792155 to 48792174 19 - TSS region transcription start site region 134220
Gm34336 15 48792668 to 48796879 4211 + lncRNA gene predicted gene, 34336
Gm7517 15 48888353 to 48890024 1671 + pseudogene predicted gene 7517
Gm49185 15 48900077 to 48900311 234 + pseudogene predicted gene, 49185
Gm23185 15 48906652 to 48906736 84 - snRNA gene predicted gene, 23185
Gm2333 15 49130623 to 49130964 341 - pseudogene predicted gene 2333
Gm41318 15 49194642 to 49203161 8519 + lincRNA gene predicted gene, 41318
Tssr131243 15 49229485 to 49229498 13 + TSS region transcription start site region 131243
Gm23848 15 49538195 to 49538300 105 + snRNA gene predicted gene, 23848
D15Mit153 15 49846698 to 49846861 163 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 153
Gm49186 15 49913382 to 49914021 639 + pseudogene predicted gene, 49186
Tssr134221 15 49942847 to 49942852 5 - TSS region transcription start site region 134221
Tssr134222 15 49981451 to 49981452 1 - TSS region transcription start site region 134222
Tssr4592 15 50176329 to 50176334 5 + TSS region transcription start site region 4592
Tssr4593 15 50194772 to 50194777 5 + TSS region transcription start site region 4593
D15Mit59 15 50269712 to 50269823 111 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 59
Gm49198 15 50286898 to 50335014 48116 + lincRNA gene predicted gene, 49198
Tssr134223 15 50309878 to 50309882 4 - TSS region transcription start site region 134223
D15Mit113 15 50395911 to 50396056 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 113
Tssr134224 15 50417425 to 50417472 47 - TSS region transcription start site region 134224
Trps1 15 50654752 to 50890463 235711 - protein coding gene transcriptional repressor GATA binding 1
Tssr134225 15 50682444 to 50682458 14 - TSS region transcription start site region 134225
Tssr134226 15 50682466 to 50682485 19 - TSS region transcription start site region 134226
Tssr134227 15 50682497 to 50682509 12 - TSS region transcription start site region 134227
Tssr134228 15 50682567 to 50682578 11 - TSS region transcription start site region 134228
Tssr134229 15 50682634 to 50682653 19 - TSS region transcription start site region 134229
Tssr134230 15 50688063 to 50688081 18 - TSS region transcription start site region 134230
Tssr134231 15 50703680 to 50703727 47 - TSS region transcription start site region 134231
Tssr134232 15 50709219 to 50709223 4 - TSS region transcription start site region 134232
Tssr134233 15 50715215 to 50715220 5 - TSS region transcription start site region 134233
Tssr134234 15 50720547 to 50720555 8 - TSS region transcription start site region 134234
Tssr134235 15 50722556 to 50722584 28 - TSS region transcription start site region 134235
Tssr134236 15 50731429 to 50731435 6 - TSS region transcription start site region 134236
5330433J24Rik 15 50740463 to 50742372 1909 unclassified gene RIKEN cDNA 5330433J24 gene
Tssr134237 15 50752310 to 50752345 35 - TSS region transcription start site region 134237
Tssr134238 15 50763195 to 50763217 22 - TSS region transcription start site region 134238
Tssr134239 15 50763357 to 50763368 11 - TSS region transcription start site region 134239
Tssr134240 15 50763400 to 50763411 11 - TSS region transcription start site region 134240
Tssr134241 15 50769555 to 50769571 16 - TSS region transcription start site region 134241
Tssr134242 15 50772024 to 50772031 7 - TSS region transcription start site region 134242
Tssr134243 15 50772179 to 50772190 11 - TSS region transcription start site region 134243
Tssr134244 15 50772541 to 50772563 22 - TSS region transcription start site region 134244
Tssr134245 15 50772588 to 50772638 50 - TSS region transcription start site region 134245
Tssr134246 15 50772707 to 50772720 13 - TSS region transcription start site region 134246
Tssr134247 15 50772790 to 50772805 15 - TSS region transcription start site region 134247
Tssr134248 15 50773153 to 50773187 34 - TSS region transcription start site region 134248
Tssr134249 15 50774641 to 50774651 10 - TSS region transcription start site region 134249
Tssr134250 15 50778351 to 50778375 24 - TSS region transcription start site region 134250
Tssr134251 15 50782015 to 50782055 40 - TSS region transcription start site region 134251
Tssr134252 15 50785160 to 50785183 23 - TSS region transcription start site region 134252
Tssr134253 15 50795311 to 50795320 9 - TSS region transcription start site region 134253
Tssr134254 15 50795404 to 50795415 11 - TSS region transcription start site region 134254
Tssr134255 15 50804141 to 50804145 4 - TSS region transcription start site region 134255
Tssr134256 15 50806688 to 50806716 28 - TSS region transcription start site region 134256
Tssr134257 15 50806779 to 50806793 14 - TSS region transcription start site region 134257
Tssr134258 15 50809746 to 50809753 7 - TSS region transcription start site region 134258
Tssr134259 15 50814266 to 50814278 12 - TSS region transcription start site region 134259
Tssr134260 15 50816871 to 50816875 4 - TSS region transcription start site region 134260
Tssr134261 15 50821672 to 50821689 17 - TSS region transcription start site region 134261
Tssr134262 15 50821719 to 50821730 11 - TSS region transcription start site region 134262
Tssr134263 15 50821811 to 50821827 16 - TSS region transcription start site region 134263
Tssr134264 15 50850383 to 50850387 4 - TSS region transcription start site region 134264
Tssr134265 15 50857728 to 50857754 26 - TSS region transcription start site region 134265
Cpgi7080 15 50869543 to 50869910 367 CpG island CpG island 7080
Tssr134266 15 50882810 to 50882822 12 - TSS region transcription start site region 134266
Cpgi7081 15 50888480 to 50888754 274 CpG island CpG island 7081
Mir1907 15 50889025 to 50889114 89 - miRNA gene microRNA 1907
Tssr134267 15 50889043 to 50889054 11 - TSS region transcription start site region 134267
Tssr134268 15 50889055 to 50889084 29 - TSS region transcription start site region 134268
Cpgi7082 15 50889174 to 50890625 1451 CpG island CpG island 7082
Tssr134269 15 50889216 to 50889259 43 - TSS region transcription start site region 134269
Tssr134270 15 50889266 to 50889346 80 - TSS region transcription start site region 134270
Tssr134271 15 50889665 to 50889688 23 - TSS region transcription start site region 134271
Tssr134272 15 50889693 to 50889714 21 - TSS region transcription start site region 134272
Tssr134273 15 50889957 to 50889968 11 - TSS region transcription start site region 134273
Tssr134274 15 50889969 to 50889994 25 - TSS region transcription start site region 134274
Tssr134275 15 50889998 to 50890012 14 - TSS region transcription start site region 134275
Tssr134276 15 50890014 to 50890026 12 - TSS region transcription start site region 134276
Tssr134277 15 50890042 to 50890064 22 - TSS region transcription start site region 134277
Tssr134278 15 50890070 to 50890086 16 - TSS region transcription start site region 134278
Tssr134279 15 50890094 to 50890108 14 - TSS region transcription start site region 134279
Tssr134280 15 50890124 to 50890138 14 - TSS region transcription start site region 134280
Tssr134281 15 50890231 to 50890257 26 - TSS region transcription start site region 134281
Tssr134282 15 50890396 to 50890441 45 - TSS region transcription start site region 134282
AA960008 15 50891724 to 50892990 1266 unclassified gene expressed sequence AA960008
Gm48913 15 50897639 to 50946307 48668 + lincRNA gene predicted gene, 48913
Tssr4594 15 51040921 to 51040924 3 + TSS region transcription start site region 4594
Gm34446 15 51081680 to 51090331 8651 + lncRNA gene predicted gene, 34446