Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:43238461-44378924

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa31 15 41599176 to 43794128 2194952 QTL B.burgdorferi-associated arthritis 31
Eif3e 15 43250058 to 43282719 32661 - protein coding gene eukaryotic translation initiation factor 3, subunit E
Tssr134189 15 43265778 to 43265794 16 - TSS region transcription start site region 134189
Cpgi7070 15 43282232 to 43282893 661 CpG island CpG island 7070
Tssr134190 15 43282695 to 43282728 33 - TSS region transcription start site region 134190
Gm33743 15 43364405 to 43377497 13092 + lncRNA gene predicted gene, 33743
Gm49271 15 43368915 to 43377673 8758 - lincRNA gene predicted gene, 49271
Gm10373 15 43430943 to 43477036 46093 - lincRNA gene predicted gene 10373
Egrd2 15 43448384 to 43448484 100 QTL early growth rate, direct effect 2
D15Mit5 15 43448384 to 43448484 100 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 5
Bgeq14 15 43448384 to 43448484 100 QTL body growth early QTL 14
Bglq16 15 43448384 to 43448484 100 QTL body growth late QTL 16
Mbis3 15 43448384 to 43448484 100 QTL Mycobacterium bovis-induced systemic lupus erythematosus 3
Habiir5 15 43448484 to 9272936 -34175548 QTL hyperoxic acute lung injury imprinted region 5
Shali3 15 43448484 to 9272936 -34175548 QTL survival time to hyperoxic acute lung injury 3
Cpgi7071 15 43477150 to 43477707 557 CpG island CpG island 7071
Tssr131221 15 43477213 to 43477270 57 + TSS region transcription start site region 131221
Emc2 15 43477229 to 43527763 50534 + protein coding gene ER membrane protein complex subunit 2
Gm41316 15 43502147 to 43503063 916 - lncRNA gene predicted gene, 41316
Tssr131222 15 43524057 to 43524061 4 + TSS region transcription start site region 131222
2900019E01Rik 15 43531500 to 43533210 1710 unclassified gene RIKEN cDNA 2900019E01 gene
4933428L01Rik 15 43699539 to 43701034 1495 unclassified gene RIKEN cDNA 4933428L01 gene
9430087N24Rik 15 43733531 to 43734735 1204 unclassified gene RIKEN cDNA 9430087N24 gene
D15Mit227 15 43738625 to 43738749 124 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 227
D15Mit274 15 43783428 to 43783534 106 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-274
Tssr134191 15 43783981 to 43783984 3 - TSS region transcription start site region 134191
D15Mit154 15 43793979 to 43794128 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 154
Gm2140 15 43808461 to 43808924 463 + pseudogene predicted gene 2140
Tmem74 15 43866695 to 43870614 3919 - protein coding gene transmembrane protein 74
Cpgi7072 15 43869854 to 43870063 209 CpG island CpG island 7072
Tssr134192 15 43869971 to 43869976 5 - TSS region transcription start site region 134192
Tssr134193 15 43869993 to 43870058 65 - TSS region transcription start site region 134193
Tssr4590 15 43994585 to 43994587 2 - TSS region transcription start site region 4590
Tssr131223 15 44064197 to 44064203 6 + TSS region transcription start site region 131223
Trhr 15 44196135 to 44235912 39777 + protein coding gene thyrotropin releasing hormone receptor
D15Mit60 15 44264658 to 44264835 177 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 60
Gm33793 15 44265842 to 44267319 1477 - lncRNA gene predicted gene, 33793
Gm7459 15 44281981 to 44283775 1794 + pseudogene predicted gene 7459
D15Mit268 15 44306093 to 44306187 94 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 268
Gm19235 15 44323112 to 44324112 1000 + pseudogene predicted gene, 19235
Gm24903 15 44345650 to 44345775 125 + snoRNA gene predicted gene, 24903
Gm25093 15 44364085 to 44364216 131 + snoRNA gene predicted gene, 25093
Nudcd1 15 44375227 to 44428307 53080 - protein coding gene NudC domain containing 1