Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:43184854-44555063

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa31 15 41599176 to 43794128 2194952 QTL B.burgdorferi-associated arthritis 31
Gm9658 15 43217150 to 43218161 1011 - pseudogene predicted gene 9658
Gm22037 15 43224625 to 43224920 295 - unclassified non-coding RNA gene predicted gene, 22037
Eif3e 15 43250058 to 43282719 32661 - protein coding gene eukaryotic translation initiation factor 3, subunit E
Tssr134189 15 43265778 to 43265794 16 - TSS region transcription start site region 134189
Cpgi7070 15 43282232 to 43282893 661 CpG island CpG island 7070
Tssr134190 15 43282695 to 43282728 33 - TSS region transcription start site region 134190
Gm33743 15 43364405 to 43377497 13092 + lncRNA gene predicted gene, 33743
Gm49271 15 43368915 to 43377673 8758 - lincRNA gene predicted gene, 49271
Gm10373 15 43430943 to 43477036 46093 - lincRNA gene predicted gene 10373
Mbis3 15 43448384 to 43448484 100 QTL Mycobacterium bovis-induced systemic lupus erythematosus 3
Egrd2 15 43448384 to 43448484 100 QTL early growth rate, direct effect 2
D15Mit5 15 43448384 to 43448484 100 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 5
Bgeq14 15 43448384 to 43448484 100 QTL body growth early QTL 14
Bglq16 15 43448384 to 43448484 100 QTL body growth late QTL 16
Shali3 15 43448484 to 9272936 -34175548 QTL survival time to hyperoxic acute lung injury 3
Habiir5 15 43448484 to 9272936 -34175548 QTL hyperoxic acute lung injury imprinted region 5
Cpgi7071 15 43477150 to 43477707 557 CpG island CpG island 7071
Tssr131221 15 43477213 to 43477270 57 + TSS region transcription start site region 131221
Emc2 15 43477229 to 43527763 50534 + protein coding gene ER membrane protein complex subunit 2
Gm41316 15 43502147 to 43503063 916 - lncRNA gene predicted gene, 41316
Tssr131222 15 43524057 to 43524061 4 + TSS region transcription start site region 131222
2900019E01Rik 15 43531500 to 43533210 1710 unclassified gene RIKEN cDNA 2900019E01 gene
4933428L01Rik 15 43699539 to 43701034 1495 unclassified gene RIKEN cDNA 4933428L01 gene
9430087N24Rik 15 43733531 to 43734735 1204 unclassified gene RIKEN cDNA 9430087N24 gene
D15Mit227 15 43738625 to 43738749 124 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 227
D15Mit274 15 43783428 to 43783534 106 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-274
Tssr134191 15 43783981 to 43783984 3 - TSS region transcription start site region 134191
D15Mit154 15 43793979 to 43794128 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 154
Gm2140 15 43808461 to 43808924 463 + pseudogene predicted gene 2140
Tmem74 15 43866695 to 43870614 3919 - protein coding gene transmembrane protein 74
Cpgi7072 15 43869854 to 43870063 209 CpG island CpG island 7072
Tssr134192 15 43869971 to 43869976 5 - TSS region transcription start site region 134192
Tssr134193 15 43869993 to 43870058 65 - TSS region transcription start site region 134193
Tssr4590 15 43994585 to 43994587 2 - TSS region transcription start site region 4590
Tssr131223 15 44064197 to 44064203 6 + TSS region transcription start site region 131223
Trhr 15 44196135 to 44235912 39777 + protein coding gene thyrotropin releasing hormone receptor
D15Mit60 15 44264658 to 44264835 177 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 60
Gm33793 15 44265842 to 44267319 1477 - lncRNA gene predicted gene, 33793
Gm7459 15 44281981 to 44283775 1794 + pseudogene predicted gene 7459
D15Mit268 15 44306093 to 44306187 94 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 268
Gm19235 15 44323112 to 44324112 1000 + pseudogene predicted gene, 19235
Gm24903 15 44345650 to 44345775 125 + snoRNA gene predicted gene, 24903
Gm25093 15 44364085 to 44364216 131 + snoRNA gene predicted gene, 25093
Nudcd1 15 44375227 to 44428307 53080 - protein coding gene NudC domain containing 1
Tssr134194 15 44422670 to 44422671 1 - TSS region transcription start site region 134194
Cpgi7073 15 44427327 to 44428598 1271 CpG island CpG island 7073
Tssr131224 15 44427400 to 44427413 13 + TSS region transcription start site region 131224
Tssr134195 15 44427794 to 44427813 19 - TSS region transcription start site region 134195
Tssr134196 15 44427827 to 44427912 85 - TSS region transcription start site region 134196
Tssr131225 15 44428073 to 44428174 101 + TSS region transcription start site region 131225
Eny2 15 44428081 to 44438256 10175 + protein coding gene ENY2 transcription and export complex 2 subunit
Tssr134197 15 44428303 to 44428337 34 - TSS region transcription start site region 134197
Gm22392 15 44432595 to 44432701 106 + snRNA gene predicted gene, 22392
Cpgi7074 15 44457367 to 44457543 176 CpG island CpG island 7074
Tssr131226 15 44457423 to 44457434 11 + TSS region transcription start site region 131226
Tssr131227 15 44457445 to 44457486 41 + TSS region transcription start site region 131227
Tssr131228 15 44457491 to 44457496 5 + TSS region transcription start site region 131228
Pkhd1l1 15 44457494 to 44601369 143875 + protein coding gene polycystic kidney and hepatic disease 1-like 1
Tssr131229 15 44457498 to 44457517 19 + TSS region transcription start site region 131229
Tssr131230 15 44457522 to 44457534 12 + TSS region transcription start site region 131230