Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:41179692-42559701

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49529 15 41242745 to 41243158 413 - pseudogene predicted gene, 49529
Gm33557 15 41256888 to 41300261 43373 - lncRNA gene predicted gene, 33557
Gm41312 15 41305297 to 41317440 12143 - lncRNA gene predicted gene, 41312
Tssr134155 15 41329672 to 41329677 5 - TSS region transcription start site region 134155
Tssr131186 15 41347428 to 41347463 35 + TSS region transcription start site region 131186
Tssr131187 15 41446823 to 41446835 12 + TSS region transcription start site region 131187
Cpgi7066 15 41446982 to 41448234 1252 CpG island CpG island 7066
Tssr131188 15 41447301 to 41447308 7 + TSS region transcription start site region 131188
Tssr131189 15 41447347 to 41447353 6 + TSS region transcription start site region 131189
Tssr131190 15 41447359 to 41447369 10 + TSS region transcription start site region 131190
Tssr131191 15 41447383 to 41447414 31 + TSS region transcription start site region 131191
Tssr131192 15 41447419 to 41447431 12 + TSS region transcription start site region 131192
Tssr131193 15 41447438 to 41447479 41 + TSS region transcription start site region 131193
Oxr1 15 41447482 to 41861048 413566 + protein coding gene oxidation resistance 1
Tssr131194 15 41447491 to 41447509 18 + TSS region transcription start site region 131194
Tssr131195 15 41447520 to 41447539 19 + TSS region transcription start site region 131195
Tssr134156 15 41448528 to 41448538 10 - TSS region transcription start site region 134156
Tssr131196 15 41487359 to 41487362 3 + TSS region transcription start site region 131196
Tssr4587 15 41504982 to 41504984 2 + TSS region transcription start site region 4587
Tssr131197 15 41511621 to 41511622 1 + TSS region transcription start site region 131197
D15Mit24 15 41599176 to 41599409 233 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 24
Bbaa22 15 41599176 to 41599409 233 QTL B.burgdorferi-associated arthritis 22
Bbaa31 15 41599176 to 43794128 2194952 QTL B.burgdorferi-associated arthritis 31
Tssr131198 15 41603315 to 41603328 13 + TSS region transcription start site region 131198
Tssr131199 15 41612576 to 41612587 11 + TSS region transcription start site region 131199
D15Mit229 15 41634759 to 41634866 107 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 229
Tssr131200 15 41710599 to 41710652 53 + TSS region transcription start site region 131200
Tssr131201 15 41710654 to 41710661 7 + TSS region transcription start site region 131201
Tssr4588 15 41751484 to 41751495 11 + TSS region transcription start site region 4588
Tssr131202 15 41751504 to 41751532 28 + TSS region transcription start site region 131202
Tssr131203 15 41751654 to 41751683 29 + TSS region transcription start site region 131203
Tssr131204 15 41751691 to 41751701 10 + TSS region transcription start site region 131204
Gm26854 15 41758060 to 41788911 30851 - antisense lncRNA gene predicted gene, 26854
Cpgi7067 15 41788394 to 41789704 1310 CpG island CpG island 7067
Tssr131205 15 41788766 to 41788778 12 + TSS region transcription start site region 131205
Tssr131206 15 41788934 to 41788977 43 + TSS region transcription start site region 131206
Tssr131207 15 41788979 to 41788988 9 + TSS region transcription start site region 131207
Tssr131208 15 41788997 to 41789013 16 + TSS region transcription start site region 131208
Tssr131209 15 41789495 to 41789527 32 + TSS region transcription start site region 131209
Tssr131210 15 41794484 to 41794489 5 + TSS region transcription start site region 131210
Tssr131211 15 41820120 to 41820142 22 + TSS region transcription start site region 131211
Tssr134157 15 41830763 to 41830770 7 - TSS region transcription start site region 134157
Tssr131212 15 41830921 to 41831001 80 + TSS region transcription start site region 131212
Tssr131213 15 41831007 to 41831018 11 + TSS region transcription start site region 131213
Tssr4589 15 41833455 to 41833459 4 + TSS region transcription start site region 4589
Tssr131214 15 41835114 to 41835125 11 + TSS region transcription start site region 131214
D15Mit255 15 41840768 to 41840892 124 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 255
Tssr131215 15 41847996 to 41848000 4 + TSS region transcription start site region 131215
Tssr131216 15 41848963 to 41848966 3 + TSS region transcription start site region 131216
Tssr131217 15 41859932 to 41859944 12 + TSS region transcription start site region 131217
Abra 15 41865293 to 41869720 4427 - protein coding gene actin-binding Rho activating protein
Tssr134158 15 41869692 to 41869701 9 - TSS region transcription start site region 134158
Tssr134159 15 41869703 to 41869727 24 - TSS region transcription start site region 134159
Gm5469 15 41922075 to 41922944 869 + pseudogene predicted gene 5469
Gm24751 15 41948997 to 41949098 101 + snoRNA gene predicted gene, 24751
Gm5470 15 42031319 to 42032742 1423 - pseudogene predicted gene 5470
Tssr134160 15 42033839 to 42033862 23 - TSS region transcription start site region 134160
Gm49439 15 42041425 to 42067553 26128 - lincRNA gene predicted gene, 49439
Gm49438 15 42055216 to 42056140 924 - unclassified gene predicted gene, 49438
Gm49440 15 42161546 to 42161875 329 - pseudogene predicted gene, 49440
Gm49441 15 42196784 to 42201302 4518 + lincRNA gene predicted gene, 49441
Gm18531 15 42256063 to 42256780 717 - pseudogene predicted gene, 18531
Gm49452 15 42311265 to 42320346 9081 - lincRNA gene predicted gene, 49452
Gm18092 15 42328601 to 42329420 819 - pseudogene predicted gene, 18092
Gm49453 15 42399755 to 42400427 672 + pseudogene predicted gene, 49453
Angpt1 15 42424723 to 42676977 252254 - protein coding gene angiopoietin 1
Bdt6 15 42432410 to 42432532 122 QTL bone density traits 6
D15Mit206 15 42432410 to 42432532 122 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 206
Tssr134161 15 42472714 to 42472722 8 - TSS region transcription start site region 134161
Tssr131218 15 42479736 to 42479745 9 + TSS region transcription start site region 131218