Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:38540946-38747681

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr131121 15 38544143 to 38544156 13 + TSS region transcription start site region 131121
D15Mit6.1 15 38544542 to 38544655 113 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 6.1
D15Mit6 15 38544641 to 38544767 126 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 6
2310043O21Rik 15 38549344 to 38594934 45590 - lincRNA gene RIKEN cDNA 2310043O21 gene
Gm41309 15 38568522 to 38602342 33820 - lncRNA gene predicted gene, 41309
Tssr4582 15 38570767 to 38570774 7 - TSS region transcription start site region 4582
Gm29697 15 38573996 to 38577707 3711 + pseudogene predicted gene, 29697
Gm49090 15 38574719 to 38574824 105 - pseudogene predicted gene, 49090
Siah1-ps2 15 38575805 to 38576649 844 - pseudogene siah E3 ubiquitin protein ligase 1, pseudogene 2
D15Mit112 15 38584051 to 38584182 131 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 112
D15Mit254 15 38604641 to 38604854 213 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 254
Tssr134134 15 38633432 to 38633439 7 - TSS region transcription start site region 134134
Tssr4583 15 38634712 to 38634721 9 + TSS region transcription start site region 4583
1100001I12Rik 15 38640946 to 38647681 6735 - lincRNA gene RIKEN cDNA 1100001I12 gene
Tssr131122 15 38644405 to 38644411 6 + TSS region transcription start site region 131122
Cpgi7055 15 38661639 to 38662489 850 CpG island CpG island 7055
Tssr131123 15 38661905 to 38661912 7 + TSS region transcription start site region 131123
Tssr131124 15 38661914 to 38661981 67 + TSS region transcription start site region 131124
Atp6v1c1 15 38661933 to 38692446 30513 + protein coding gene ATPase, H+ transporting, lysosomal V1 subunit C1
Tssr131125 15 38661985 to 38661999 14 + TSS region transcription start site region 131125
Tssr131126 15 38673892 to 38673931 39 + TSS region transcription start site region 131126
Tssr131127 15 38686464 to 38686469 5 + TSS region transcription start site region 131127
Tssr131128 15 38691616 to 38691640 24 + TSS region transcription start site region 131128
Tssr134135 15 38709787 to 38709801 14 - TSS region transcription start site region 134135
Tssr4584 15 38710690 to 38710730 40 + TSS region transcription start site region 4584
Gm45924 15 38713483 to 38728516 15033 - lincRNA gene predicted gene, 45924
D15Mit1007 15 38722884 to 38723083 199 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 1007
Toa2 15 38722884 to 43172395 4449511 QTL testicular oocyte appearance 2