Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 15:38285634-38504154

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31 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opfaq12 15 34358765 to 38447657 4088892 QTL open field activity QTL 12
Klf10 15 38291463 to 38300706 9243 - protein coding gene Kruppel-like factor 10
Tssr134123 15 38294979 to 38294983 4 - TSS region transcription start site region 134123
Cpgi7049 15 38298873 to 38301994 3121 CpG island CpG island 7049
Tssr131113 15 38299357 to 38299366 9 + TSS region transcription start site region 131113
Tssr131114 15 38299508 to 38299514 6 + TSS region transcription start site region 131114
Tssr134124 15 38299690 to 38299693 3 - TSS region transcription start site region 134124
Tssr4579 15 38300285 to 38300289 4 + TSS region transcription start site region 4579
Tssr131115 15 38300392 to 38300393 1 + TSS region transcription start site region 131115
Tssr134125 15 38300660 to 38300671 11 - TSS region transcription start site region 134125
Tssr134126 15 38300693 to 38300715 22 - TSS region transcription start site region 134126
Tssr131116 15 38301192 to 38301220 28 + TSS region transcription start site region 131116
Gm35248 15 38312293 to 38343139 30846 + lncRNA gene predicted gene, 35248
Tssr4580 15 38322202 to 38322209 7 + TSS region transcription start site region 4580
Gm41306 15 38357342 to 38366081 8739 - lncRNA gene predicted gene, 41306
Cpgi7050 15 38373758 to 38374122 364 CpG island CpG island 7050
Cpgi7051 15 38384592 to 38384853 261 CpG island CpG island 7051
Gm41307 15 38385634 to 38404154 18520 - lncRNA gene predicted gene, 41307
G930009F23Rik 15 38441989 to 38455508 13519 - lncRNA gene RIKEN cDNA G930009F23 gene
Tssr134127 15 38455120 to 38455139 19 - TSS region transcription start site region 134127
Tssr134128 15 38455157 to 38455171 14 - TSS region transcription start site region 134128
Tssr134129 15 38455241 to 38455266 25 - TSS region transcription start site region 134129
Tssr131117 15 38455369 to 38455383 14 + TSS region transcription start site region 131117
Cpgi7052 15 38470230 to 38471658 1428 CpG island CpG island 7052
Tssr131118 15 38470723 to 38470757 34 + TSS region transcription start site region 131118
Gm41308 15 38473228 to 38478270 5042 + lncRNA gene predicted gene, 41308
Cpgi7053 15 38473422 to 38473996 574 CpG island CpG island 7053
Tssr134130 15 38473721 to 38473732 11 - TSS region transcription start site region 134130
Manh78 15 38484397 to 38484397 0 QTL mandible shape 78
Azin1 15 38487427 to 38519266 31839 - protein coding gene antizyme inhibitor 1
Mir6951 15 38490473 to 38490547 74 - miRNA gene microRNA 6951