Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:37785009-38185013

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncald 15 37366175 to 37792570 426395 - protein coding gene neurocalcin delta
Cpgi7045 15 37791251 to 37792574 1323 CpG island CpG island 7045
Tssr134101 15 37791993 to 37792005 12 - TSS region transcription start site region 134101
Tssr134102 15 37792019 to 37792036 17 - TSS region transcription start site region 134102
Tssr134103 15 37792039 to 37792060 21 - TSS region transcription start site region 134103
Tssr134104 15 37792166 to 37792188 22 - TSS region transcription start site region 134104
Tssr134105 15 37792391 to 37792415 24 - TSS region transcription start site region 134105
Rps19-ps5 15 37868086 to 37868488 402 + pseudogene ribosomal protein S19, pseudogene 5
Gm35019 15 37892995 to 37899716 6721 - lincRNA gene predicted gene, 35019
Tssr134106 15 37899693 to 37899707 14 - TSS region transcription start site region 134106
Rrm2b 15 37923952 to 37961110 37158 - protein coding gene ribonucleotide reductase M2 B (TP53 inducible)
Gm3362 15 37943327 to 37943792 465 - pseudogene predicted pseudogene 3362
Tssr134107 15 37960083 to 37960087 4 - TSS region transcription start site region 134107
Gm49085 15 37960471 to 37966218 5747 + antisense lncRNA gene predicted gene, 49085
Cpgi7046 15 37960506 to 37961599 1093 CpG island CpG island 7046
Tssr134108 15 37960916 to 37960935 19 - TSS region transcription start site region 134108
Tssr134109 15 37961059 to 37961107 48 - TSS region transcription start site region 134109
Tssr134110 15 37966362 to 37966366 4 - TSS region transcription start site region 134110
Ubr5 15 37967328 to 38078854 111526 - protein coding gene ubiquitin protein ligase E3 component n-recognin 5
Tssr134111 15 37968446 to 37968464 18 - TSS region transcription start site region 134111
Tssr134112 15 37972686 to 37972693 7 - TSS region transcription start site region 134112
Tssr134113 15 37985009 to 37985013 4 - TSS region transcription start site region 134113
Tssr134114 15 38004690 to 38004694 4 - TSS region transcription start site region 134114
Tssr134115 15 38009660 to 38009685 25 - TSS region transcription start site region 134115
Tssr134116 15 38022239 to 38022244 5 - TSS region transcription start site region 134116
Gm22353 15 38058285 to 38058420 135 + snoRNA gene predicted gene, 22353
Tssr134117 15 38059748 to 38059753 5 - TSS region transcription start site region 134117
Tssr134118 15 38061604 to 38061607 3 - TSS region transcription start site region 134118
Tssr134119 15 38072407 to 38072409 2 - TSS region transcription start site region 134119
Cpgi7047 15 38077812 to 38079238 1426 CpG island CpG island 7047
Tssr134120 15 38078822 to 38078836 14 - TSS region transcription start site region 134120
Tssr134121 15 38078842 to 38078860 18 - TSS region transcription start site region 134121
Tssr131105 15 38079044 to 38079094 50 + TSS region transcription start site region 131105
Tssr131106 15 38079101 to 38079117 16 + TSS region transcription start site region 131106
Gm49312 15 38079102 to 38079563 461 + bidirectional promoter lncRNA gene predicted gene, 49312
Tssr131107 15 38087983 to 38087988 5 + TSS region transcription start site region 131107
D15Mit165 15 38094936 to 38095080 144 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 165
Gm35081 15 38143704 to 38147564 3860 + lncRNA gene predicted gene, 35081
Gm35167 15 38184009 to 38199681 15672 - lincRNA gene predicted gene, 35167