Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:36976322-37766447

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp706 15 36997027 to 37007402 10375 - protein coding gene zinc finger protein 706
Tssr134075 15 37004134 to 37004139 5 - TSS region transcription start site region 134075
Cpgi7040 15 37006869 to 37007995 1126 CpG island CpG island 7040
Tssr134076 15 37007274 to 37007353 79 - TSS region transcription start site region 134076
Tssr134077 15 37007358 to 37007372 14 - TSS region transcription start site region 134077
Tssr134078 15 37007382 to 37007402 20 - TSS region transcription start site region 134078
Gm26766 15 37007507 to 37022830 15323 + antisense lncRNA gene predicted gene, 26766
Tssr131089 15 37007545 to 37007592 47 + TSS region transcription start site region 131089
Tssr131090 15 37007597 to 37007615 18 + TSS region transcription start site region 131090
Tssr134079 15 37007767 to 37007788 21 - TSS region transcription start site region 134079
Tssr134080 15 37007799 to 37007804 5 - TSS region transcription start site region 134080
Tssr4578 15 37024715 to 37024716 1 + TSS region transcription start site region 4578
Gm34724 15 37044240 to 37046428 2188 - lncRNA gene predicted gene, 34724
Tssr131091 15 37071606 to 37071652 46 + TSS region transcription start site region 131091
Tssr134081 15 37080399 to 37080408 9 - TSS region transcription start site region 134081
Tssr131092 15 37090356 to 37090370 14 + TSS region transcription start site region 131092
Cpgi7041 15 37121153 to 37121322 169 CpG island CpG island 7041
Gm41302 15 37124027 to 37168211 44184 - lncRNA gene predicted gene, 41302
Gm41301 15 37133223 to 37135523 2300 - lncRNA gene predicted gene, 41301
Cpgi7042 15 37135360 to 37136073 713 CpG island CpG island 7042
Tssr134082 15 37135751 to 37135769 18 - TSS region transcription start site region 134082
Tssr131093 15 37135901 to 37135914 13 + TSS region transcription start site region 131093
Gm34820 15 37135947 to 37168142 32195 + lncRNA gene predicted gene, 34820
Gm9509 15 37171355 to 37172404 1049 - pseudogene predicted gene 9509
Gm8664 15 37181345 to 37182701 1356 - pseudogene predicted gene 8664
Gm41303 15 37195370 to 37198656 3286 - lncRNA gene predicted gene, 41303
Gm16136 15 37231798 to 37233159 1361 - antisense lncRNA gene predicted gene 16136
Cpgi7043 15 37232442 to 37234813 2371 CpG island CpG island 7043
Tssr134083 15 37232906 to 37232925 19 - TSS region transcription start site region 134083
Grhl2 15 37233036 to 37363569 130533 + protein coding gene grainyhead like transcription factor 2
Tssr131094 15 37233041 to 37233073 32 + TSS region transcription start site region 131094
Tssr131095 15 37233079 to 37233094 15 + TSS region transcription start site region 131095
Tssr134084 15 37233095 to 37233109 14 - TSS region transcription start site region 134084
Tssr134085 15 37233121 to 37233149 28 - TSS region transcription start site region 134085
Tssr134086 15 37233161 to 37233182 21 - TSS region transcription start site region 134086
Tssr131096 15 37233286 to 37233306 20 + TSS region transcription start site region 131096
Tssr134087 15 37233292 to 37233332 40 - TSS region transcription start site region 134087
Tssr131097 15 37233310 to 37233337 27 + TSS region transcription start site region 131097
Tssr131098 15 37233369 to 37233398 29 + TSS region transcription start site region 131098
Tssr134088 15 37234398 to 37234415 17 - TSS region transcription start site region 134088
Gm16137 15 37242403 to 37243162 759 - antisense lncRNA gene predicted gene 16137
D15Mit49 15 37260048 to 37260225 177 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 49
Tssr131099 15 37264387 to 37264409 22 + TSS region transcription start site region 131099
Cpgi7044 15 37279377 to 37279790 413 CpG island CpG island 7044
Tssr131100 15 37318383 to 37318407 24 + TSS region transcription start site region 131100
Gm16138 15 37331989 to 37332809 820 - pseudogene predicted gene 16138
Tssr131101 15 37337677 to 37337687 10 + TSS region transcription start site region 131101
Tssr131102 15 37346497 to 37346502 5 + TSS region transcription start site region 131102
Ncald 15 37366175 to 37792570 426395 - protein coding gene neurocalcin delta
Gm28221 15 37367205 to 37368498 1293 + antisense lncRNA gene predicted gene 28221
Tssr134089 15 37368315 to 37368326 11 - TSS region transcription start site region 134089
Gm23654 15 37371322 to 37371447 125 - miRNA gene predicted gene, 23654
Tssr134090 15 37381616 to 37381621 5 - TSS region transcription start site region 134090
Gm15941 15 37421133 to 37432664 11531 - antisense lncRNA gene predicted gene 15941
Gm8668 15 37421248 to 37422694 1446 + pseudogene predicted gene 8668
4930447A16Rik 15 37425554 to 37440644 15090 + protein coding gene RIKEN cDNA 4930447A16 gene
Gm49397 15 37432477 to 37734335 301858 - unclassified non-coding RNA gene predicted gene, 49397
Tssr134091 15 37433044 to 37433060 16 - TSS region transcription start site region 134091
Tssr134092 15 37458523 to 37458581 58 - TSS region transcription start site region 134092
Tssr134093 15 37459327 to 37459380 53 - TSS region transcription start site region 134093
Tssr134094 15 37459381 to 37459405 24 - TSS region transcription start site region 134094
Tssr134095 15 37459408 to 37459411 3 - TSS region transcription start site region 134095
Tssr134096 15 37474061 to 37474071 10 - TSS region transcription start site region 134096
Gm3267 15 37492756 to 37493228 472 + pseudogene predicted gene 3267
Gm41305 15 37514812 to 37529814 15002 + lncRNA gene predicted gene, 41305
Tssr131103 15 37517483 to 37517488 5 + TSS region transcription start site region 131103
Gm49311 15 37559026 to 37561830 2804 - unclassified gene predicted gene, 49311
Gm24833 15 37603415 to 37603534 119 - snRNA gene predicted gene, 24833
D15Mit256 15 37640517 to 37640637 120 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 256
Gm41304 15 37641698 to 37650931 9233 + lncRNA gene predicted gene, 41304
Tssr134097 15 37680493 to 37680502 9 - TSS region transcription start site region 134097
Gm15942 15 37699613 to 37701407 1794 + antisense lncRNA gene predicted gene 15942
Tssr134098 15 37734402 to 37734432 30 - TSS region transcription start site region 134098
Tssr131104 15 37754438 to 37754445 7 + TSS region transcription start site region 131104
Gm15940 15 37762832 to 37765401 2569 - sense intronic lncRNA gene predicted gene 15940
Tssr134099 15 37764538 to 37764556 18 - TSS region transcription start site region 134099