Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:36923036-37673569

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41300 15 36917552 to 36931785 14233 - lincRNA gene predicted gene, 41300
Tssr134074 15 36931661 to 36931710 49 - TSS region transcription start site region 134074
Cpgi7037 15 36938373 to 36939332 959 CpG island CpG island 7037
Gm34590 15 36938864 to 36949605 10741 + lincRNA gene predicted gene, 34590
Cpgi7038 15 36955275 to 36955522 247 CpG island CpG island 7038
Cpgi7039 15 36967333 to 36967525 192 CpG island CpG island 7039
Zfp706 15 36997027 to 37007402 10375 - protein coding gene zinc finger protein 706
Tssr134075 15 37004134 to 37004139 5 - TSS region transcription start site region 134075
Cpgi7040 15 37006869 to 37007995 1126 CpG island CpG island 7040
Tssr134076 15 37007274 to 37007353 79 - TSS region transcription start site region 134076
Tssr134077 15 37007358 to 37007372 14 - TSS region transcription start site region 134077
Tssr134078 15 37007382 to 37007402 20 - TSS region transcription start site region 134078
Gm26766 15 37007507 to 37022830 15323 + antisense lncRNA gene predicted gene, 26766
Tssr131089 15 37007545 to 37007592 47 + TSS region transcription start site region 131089
Tssr131090 15 37007597 to 37007615 18 + TSS region transcription start site region 131090
Tssr134079 15 37007767 to 37007788 21 - TSS region transcription start site region 134079
Tssr134080 15 37007799 to 37007804 5 - TSS region transcription start site region 134080
Tssr4578 15 37024715 to 37024716 1 + TSS region transcription start site region 4578
Gm34724 15 37044240 to 37046428 2188 - lncRNA gene predicted gene, 34724
Tssr131091 15 37071606 to 37071652 46 + TSS region transcription start site region 131091
Tssr134081 15 37080399 to 37080408 9 - TSS region transcription start site region 134081
Tssr131092 15 37090356 to 37090370 14 + TSS region transcription start site region 131092
Cpgi7041 15 37121153 to 37121322 169 CpG island CpG island 7041
Gm41302 15 37124027 to 37168211 44184 - lncRNA gene predicted gene, 41302
Gm41301 15 37133223 to 37135523 2300 - lncRNA gene predicted gene, 41301
Cpgi7042 15 37135360 to 37136073 713 CpG island CpG island 7042
Tssr134082 15 37135751 to 37135769 18 - TSS region transcription start site region 134082
Tssr131093 15 37135901 to 37135914 13 + TSS region transcription start site region 131093
Gm34820 15 37135947 to 37168142 32195 + lncRNA gene predicted gene, 34820
Gm9509 15 37171355 to 37172404 1049 - pseudogene predicted gene 9509
Gm8664 15 37181345 to 37182701 1356 - pseudogene predicted gene 8664
Gm41303 15 37195370 to 37198656 3286 - lncRNA gene predicted gene, 41303
Gm16136 15 37231798 to 37233159 1361 - antisense lncRNA gene predicted gene 16136
Cpgi7043 15 37232442 to 37234813 2371 CpG island CpG island 7043
Tssr134083 15 37232906 to 37232925 19 - TSS region transcription start site region 134083
Grhl2 15 37233036 to 37363569 130533 + protein coding gene grainyhead like transcription factor 2
Tssr131094 15 37233041 to 37233073 32 + TSS region transcription start site region 131094
Tssr131095 15 37233079 to 37233094 15 + TSS region transcription start site region 131095
Tssr134084 15 37233095 to 37233109 14 - TSS region transcription start site region 134084
Tssr134085 15 37233121 to 37233149 28 - TSS region transcription start site region 134085
Tssr134086 15 37233161 to 37233182 21 - TSS region transcription start site region 134086
Tssr131096 15 37233286 to 37233306 20 + TSS region transcription start site region 131096
Tssr134087 15 37233292 to 37233332 40 - TSS region transcription start site region 134087
Tssr131097 15 37233310 to 37233337 27 + TSS region transcription start site region 131097
Tssr131098 15 37233369 to 37233398 29 + TSS region transcription start site region 131098
Tssr134088 15 37234398 to 37234415 17 - TSS region transcription start site region 134088
Gm16137 15 37242403 to 37243162 759 - antisense lncRNA gene predicted gene 16137
D15Mit49 15 37260048 to 37260225 177 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 49
Tssr131099 15 37264387 to 37264409 22 + TSS region transcription start site region 131099
Cpgi7044 15 37279377 to 37279790 413 CpG island CpG island 7044
Tssr131100 15 37318383 to 37318407 24 + TSS region transcription start site region 131100
Gm16138 15 37331989 to 37332809 820 - pseudogene predicted gene 16138
Tssr131101 15 37337677 to 37337687 10 + TSS region transcription start site region 131101
Tssr131102 15 37346497 to 37346502 5 + TSS region transcription start site region 131102
Ncald 15 37366175 to 37792570 426395 - protein coding gene neurocalcin delta
Gm28221 15 37367205 to 37368498 1293 + antisense lncRNA gene predicted gene 28221
Tssr134089 15 37368315 to 37368326 11 - TSS region transcription start site region 134089
Gm23654 15 37371322 to 37371447 125 - miRNA gene predicted gene, 23654
Tssr134090 15 37381616 to 37381621 5 - TSS region transcription start site region 134090
Gm15941 15 37421133 to 37432664 11531 - antisense lncRNA gene predicted gene 15941
Gm8668 15 37421248 to 37422694 1446 + pseudogene predicted gene 8668
4930447A16Rik 15 37425554 to 37440644 15090 + protein coding gene RIKEN cDNA 4930447A16 gene
Gm49397 15 37432477 to 37734335 301858 - unclassified non-coding RNA gene predicted gene, 49397
Tssr134091 15 37433044 to 37433060 16 - TSS region transcription start site region 134091
Tssr134092 15 37458523 to 37458581 58 - TSS region transcription start site region 134092
Tssr134093 15 37459327 to 37459380 53 - TSS region transcription start site region 134093
Tssr134094 15 37459381 to 37459405 24 - TSS region transcription start site region 134094
Tssr134095 15 37459408 to 37459411 3 - TSS region transcription start site region 134095
Tssr134096 15 37474061 to 37474071 10 - TSS region transcription start site region 134096
Gm3267 15 37492756 to 37493228 472 + pseudogene predicted gene 3267
Gm41305 15 37514812 to 37529814 15002 + lncRNA gene predicted gene, 41305
Tssr131103 15 37517483 to 37517488 5 + TSS region transcription start site region 131103
Gm49311 15 37559026 to 37561830 2804 - unclassified gene predicted gene, 49311
Gm24833 15 37603415 to 37603534 119 - snRNA gene predicted gene, 24833
D15Mit256 15 37640517 to 37640637 120 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 256
Gm41304 15 37641698 to 37650931 9233 + lncRNA gene predicted gene, 41304