Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:36227668-36746791

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spag1 15 36178099 to 36235621 57522 + protein coding gene sperm associated antigen 1
Rnf19a 15 36239934 to 36283147 43213 - protein coding gene ring finger protein 19A
Mir8097 15 36240046 to 36240164 118 - miRNA gene microRNA 8097
5430434G16Rik 15 36250505 to 36252756 2251 unclassified gene RIKEN cDNA 5430434G16 gene
Tssr134010 15 36271367 to 36271373 6 - TSS region transcription start site region 134010
Tssr134011 15 36276795 to 36276800 5 - TSS region transcription start site region 134011
Cpgi7028 15 36282315 to 36283598 1283 CpG island CpG island 7028
Tssr131073 15 36282499 to 36282511 12 + TSS region transcription start site region 131073
Tssr134012 15 36283105 to 36283150 45 - TSS region transcription start site region 134012
Tssr131074 15 36283246 to 36283306 60 + TSS region transcription start site region 131074
Gm9501 15 36299624 to 36300475 851 + pseudogene predicted gene 9501
Rpl7a-ps3 15 36308149 to 36308944 795 - pseudogene ribosomal protein L7A, pseudogene 3
Gm41294 15 36317396 to 36318991 1595 - lncRNA gene predicted gene, 41294
Gm38600 15 36321973 to 36340926 18953 + lncRNA gene predicted gene, 38600
Gm33826 15 36324546 to 36330146 5600 - lncRNA gene predicted gene, 33826
Gm33936 15 36341217 to 36367117 25900 - lncRNA gene predicted gene, 33936
Tssr134013 15 36346173 to 36346181 8 - TSS region transcription start site region 134013
Tssr134014 15 36367102 to 36367111 9 - TSS region transcription start site region 134014
Tssr134015 15 36367115 to 36367121 6 - TSS region transcription start site region 134015
Tssr134016 15 36374341 to 36374354 13 - TSS region transcription start site region 134016
Gm34150 15 36375049 to 36376090 1041 + lincRNA gene predicted gene, 34150
Gm34093 15 36375343 to 36390172 14829 - lincRNA gene predicted gene, 34093
Gm49224 15 36433319 to 36436691 3372 - lincRNA gene predicted gene, 49224
Tssr131075 15 36439074 to 36439087 13 + TSS region transcription start site region 131075
Tssr131076 15 36439358 to 36439366 8 + TSS region transcription start site region 131076
Gm34316 15 36453249 to 36456583 3334 - lncRNA gene predicted gene, 34316
Tssr134017 15 36455524 to 36455542 18 - TSS region transcription start site region 134017
D15Mit205 15 36475918 to 36476041 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 205
Ankrd46 15 36477668 to 36496791 19123 - protein coding gene ankyrin repeat domain 46
Cpgi7029 15 36496261 to 36496962 701 CpG island CpG island 7029
Tssr134018 15 36496722 to 36496808 86 - TSS region transcription start site region 134018
Gm49246 15 36499977 to 36503431 3454 - unclassified gene predicted gene, 49246
Snx31 15 36504062 to 36555573 51511 - protein coding gene sorting nexin 31
Tssr134019 15 36555313 to 36555348 35 - TSS region transcription start site region 134019
Cpgi7030 15 36555319 to 36555620 301 CpG island CpG island 7030
Tssr134020 15 36555536 to 36555539 3 - TSS region transcription start site region 134020
Tssr134021 15 36555556 to 36555579 23 - TSS region transcription start site region 134021
Tssr134022 15 36555586 to 36555592 6 - TSS region transcription start site region 134022
Cpgi7031 15 36573834 to 36574060 226 CpG island CpG island 7031
Gm44310 15 36583544 to 36583669 125 + miRNA gene predicted gene, 44310
Tssr134023 15 36595295 to 36595299 4 - TSS region transcription start site region 134023
Pabpc1 15 36595658 to 36609581 13923 - protein coding gene poly(A) binding protein, cytoplasmic 1
Tssr134024 15 36598097 to 36598124 27 - TSS region transcription start site region 134024
Tssr134025 15 36600919 to 36600940 21 - TSS region transcription start site region 134025
Tssr134026 15 36605515 to 36605554 39 - TSS region transcription start site region 134026
Cpgi7032 15 36607819 to 36609961 2142 CpG island CpG island 7032
Tssr134027 15 36607846 to 36607855 9 - TSS region transcription start site region 134027
Tssr134028 15 36608355 to 36608360 5 - TSS region transcription start site region 134028
Tssr134029 15 36608367 to 36608377 10 - TSS region transcription start site region 134029
Tssr134030 15 36608484 to 36608513 29 - TSS region transcription start site region 134030
Tssr134031 15 36608551 to 36608619 68 - TSS region transcription start site region 134031
Tssr131077 15 36608606 to 36608642 36 + TSS region transcription start site region 131077
Tssr134032 15 36608621 to 36608622 1 - TSS region transcription start site region 134032
Tssr134033 15 36608624 to 36608635 11 - TSS region transcription start site region 134033
Tssr134034 15 36608650 to 36608661 11 - TSS region transcription start site region 134034
Tssr134035 15 36608692 to 36608720 28 - TSS region transcription start site region 134035
Tssr134036 15 36608745 to 36608772 27 - TSS region transcription start site region 134036
Tssr134037 15 36608794 to 36608802 8 - TSS region transcription start site region 134037
Tssr134038 15 36608826 to 36608840 14 - TSS region transcription start site region 134038
Tssr134039 15 36608959 to 36608983 24 - TSS region transcription start site region 134039
Tssr134040 15 36609134 to 36609139 5 - TSS region transcription start site region 134040
Tssr134041 15 36609511 to 36609528 17 - TSS region transcription start site region 134041
Tssr134042 15 36609540 to 36609566 26 - TSS region transcription start site region 134042
Tssr134043 15 36609568 to 36609620 52 - TSS region transcription start site region 134043
Gm49262 15 36629160 to 36629991 831 + lincRNA gene predicted gene, 49262
Gm6704 15 36629645 to 36629869 224 - pseudogene predicted gene 6704
Cpgi7033 15 36669937 to 36670115 178 CpG island CpG island 7033
Gm46515 15 36681502 to 36695764 14262 - lincRNA gene predicted gene, 46515
D15Mit57 15 36682619 to 36682723 104 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 57
Gm10385 15 36690103 to 36694949 4846 + lincRNA gene predicted gene 10385
Gm41296 15 36704057 to 36709530 5473 - lncRNA gene predicted gene, 41296
Gm41297 15 36717882 to 36728465 10583 - lncRNA gene predicted gene, 41297
Gm49263 15 36723647 to 36725236 1589 + lincRNA gene predicted gene, 49263
Tssr131078 15 36725271 to 36725277 6 + TSS region transcription start site region 131078
A830021M18Rik 15 36726217 to 36730786 4569 + lncRNA gene RIKEN cDNA A830021M18 gene
Tssr131079 15 36726320 to 36726325 5 + TSS region transcription start site region 131079
Tssr131080 15 36726361 to 36726379 18 + TSS region transcription start site region 131080
Tssr131081 15 36726392 to 36726401 9 + TSS region transcription start site region 131081
Tssr131082 15 36726667 to 36726696 29 + TSS region transcription start site region 131082
Tssr131083 15 36726860 to 36726872 12 + TSS region transcription start site region 131083
Tssr131084 15 36726906 to 36726941 35 + TSS region transcription start site region 131084
Cpgi7034 15 36727336 to 36727994 658 CpG island CpG island 7034