Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:36197396-36438991

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spag1 15 36178099 to 36235621 57522 + protein coding gene sperm associated antigen 1
Gm23754 15 36205260 to 36205322 62 + snRNA gene predicted gene, 23754
Gm41293 15 36206374 to 36210705 4331 - antisense lncRNA gene predicted gene, 41293
Cpgi7026 15 36210279 to 36210993 714 CpG island CpG island 7026
Tssr131069 15 36210468 to 36210489 21 + TSS region transcription start site region 131069
Tssr131070 15 36210497 to 36210523 26 + TSS region transcription start site region 131070
Tssr131071 15 36210527 to 36210544 17 + TSS region transcription start site region 131071
Cpgi7027 15 36214307 to 36214876 569 CpG island CpG island 7027
Tssr131072 15 36226215 to 36226219 4 + TSS region transcription start site region 131072
Rnf19a 15 36239934 to 36283147 43213 - protein coding gene ring finger protein 19A
Mir8097 15 36240046 to 36240164 118 - miRNA gene microRNA 8097
5430434G16Rik 15 36250505 to 36252756 2251 unclassified gene RIKEN cDNA 5430434G16 gene
Tssr134010 15 36271367 to 36271373 6 - TSS region transcription start site region 134010
Tssr134011 15 36276795 to 36276800 5 - TSS region transcription start site region 134011
Cpgi7028 15 36282315 to 36283598 1283 CpG island CpG island 7028
Tssr131073 15 36282499 to 36282511 12 + TSS region transcription start site region 131073
Tssr134012 15 36283105 to 36283150 45 - TSS region transcription start site region 134012
Tssr131074 15 36283246 to 36283306 60 + TSS region transcription start site region 131074
Gm9501 15 36299624 to 36300475 851 + pseudogene predicted gene 9501
Rpl7a-ps3 15 36308149 to 36308944 795 - pseudogene ribosomal protein L7A, pseudogene 3
Gm41294 15 36317396 to 36318991 1595 - lncRNA gene predicted gene, 41294
Gm38600 15 36321973 to 36340926 18953 + lncRNA gene predicted gene, 38600
Gm33826 15 36324546 to 36330146 5600 - lncRNA gene predicted gene, 33826
Gm33936 15 36341217 to 36367117 25900 - lncRNA gene predicted gene, 33936
Tssr134013 15 36346173 to 36346181 8 - TSS region transcription start site region 134013
Tssr134014 15 36367102 to 36367111 9 - TSS region transcription start site region 134014
Tssr134015 15 36367115 to 36367121 6 - TSS region transcription start site region 134015
Tssr134016 15 36374341 to 36374354 13 - TSS region transcription start site region 134016
Gm34150 15 36375049 to 36376090 1041 + lincRNA gene predicted gene, 34150
Gm34093 15 36375343 to 36390172 14829 - lincRNA gene predicted gene, 34093
Gm49224 15 36433319 to 36436691 3372 - lincRNA gene predicted gene, 49224