Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:35300831-36020918

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Osr2 15 35296098 to 35303305 7207 + protein coding gene odd-skipped related 2
Cpgi7018 15 35302415 to 35303034 619 CpG island CpG island 7018
Tssr131049 15 35303589 to 35303594 5 + TSS region transcription start site region 131049
BC048602 15 35307010 to 35328535 21525 - lincRNA gene cDNA sequence BC048602
Tssr131050 15 35313273 to 35313314 41 + TSS region transcription start site region 131050
Cpgi7019 15 35326309 to 35326961 652 CpG island CpG island 7019
Gm33584 15 35328990 to 35340366 11376 + lncRNA gene predicted gene, 33584
Tssr131051 15 35329171 to 35329192 21 + TSS region transcription start site region 131051
Gm48960 15 35368453 to 35373147 4694 - antisense lncRNA gene predicted gene, 48960
Cpgi7020 15 35371010 to 35372067 1057 CpG island CpG island 7020
Tssr131052 15 35371073 to 35371094 21 + TSS region transcription start site region 131052
Tssr131053 15 35371109 to 35371138 29 + TSS region transcription start site region 131053
Tssr131054 15 35371155 to 35371168 13 + TSS region transcription start site region 131054
Vps13b 15 35371160 to 35931229 560069 + protein coding gene vacuolar protein sorting 13B
Tssr131055 15 35371253 to 35371260 7 + TSS region transcription start site region 131055
Tssr131056 15 35371293 to 35371369 76 + TSS region transcription start site region 131056
Tssr131057 15 35371498 to 35371593 95 + TSS region transcription start site region 131057
Tssr131058 15 35431381 to 35431395 14 + TSS region transcription start site region 131058
Gm24771 15 35487400 to 35487536 136 + snoRNA gene predicted gene, 24771
Tssr131059 15 35491993 to 35492008 15 + TSS region transcription start site region 131059
Tssr131060 15 35501907 to 35501912 5 + TSS region transcription start site region 131060
Tssr131061 15 35531460 to 35531468 8 + TSS region transcription start site region 131061
Gm48966 15 35568243 to 35569885 1642 + unclassified gene predicted gene, 48966
Gm7968 15 35589314 to 35591638 2324 + unclassified gene predicted gene 7968
Tssr131062 15 35591847 to 35591857 10 + TSS region transcription start site region 131062
Tssr131063 15 35653834 to 35653844 10 + TSS region transcription start site region 131063
Mir599 15 35660831 to 35660918 87 - miRNA gene microRNA 599
Mir875 15 35660970 to 35661047 77 - miRNA gene microRNA 875
Gm18994 15 35733604 to 35734622 1018 + pseudogene predicted gene, 18994
9130002K18Rik 15 35787154 to 35790279 3125 + unclassified non-coding RNA gene RIKEN cDNA 9130002K18 gene
D15Mit56 15 35822471 to 35822570 99 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 56
Gm48965 15 35855394 to 35857791 2397 + unclassified gene predicted gene, 48965
Gm48961 15 35860510 to 35863368 2858 + unclassified gene predicted gene, 48961
Gm41292 15 35864334 to 35886870 22536 - lncRNA gene predicted gene, 41292
Tssr133994 15 35913191 to 35913192 1 - TSS region transcription start site region 133994
Cox6c 15 35931976 to 35938246 6270 - protein coding gene cytochrome c oxidase subunit 6C
Tssr133995 15 35932285 to 35932286 1 - TSS region transcription start site region 133995
Tssr133996 15 35937280 to 35937292 12 - TSS region transcription start site region 133996
Cpgi7021 15 35937358 to 35938289 931 CpG island CpG island 7021
Tssr133997 15 35938156 to 35938178 22 - TSS region transcription start site region 133997
Tssr133998 15 35938186 to 35938203 17 - TSS region transcription start site region 133998
Rgs22 15 36009479 to 36140400 130921 - protein coding gene regulator of G-protein signalling 22
Tssr133999 15 36010834 to 36010838 4 - TSS region transcription start site region 133999