Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:34489970-35093675

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rida 15 34484022 to 34495246 11224 - protein coding gene reactive intermediate imine deaminase A homolog
Tssr133973 15 34495150 to 34495159 9 - TSS region transcription start site region 133973
Cpgi7010 15 34495163 to 34495796 633 CpG island CpG island 7010
Tssr133974 15 34495167 to 34495171 4 - TSS region transcription start site region 133974
Tssr133975 15 34495180 to 34495276 96 - TSS region transcription start site region 133975
Tssr131039 15 34495302 to 34495347 45 + TSS region transcription start site region 131039
Pop1 15 34495311 to 34530653 35342 + protein coding gene processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
Tssr131040 15 34495364 to 34495385 21 + TSS region transcription start site region 131040
Tssr131041 15 34496244 to 34496250 6 + TSS region transcription start site region 131041
Gm49195 15 34531560 to 34531698 138 + pseudogene predicted gene, 49195
Gm22208 15 34531714 to 34531823 109 + snRNA gene predicted gene, 22208
Nipal2 15 34572799 to 34679212 106413 - protein coding gene NIPA-like domain containing 2
Tssr4576 15 34609892 to 34609897 5 + TSS region transcription start site region 4576
9030408N04Rik 15 34665271 to 34666051 780 unclassified gene RIKEN cDNA 9030408N04 gene
Tssr131042 15 34674997 to 34675007 10 + TSS region transcription start site region 131042
4930413F20Rik 15 34675073 to 34679204 4131 + antisense lncRNA gene RIKEN cDNA 4930413F20 gene
Cpgi7011 15 34678286 to 34678970 684 CpG island CpG island 7011
Tssr133976 15 34678694 to 34678746 52 - TSS region transcription start site region 133976
Tssr133977 15 34678755 to 34678802 47 - TSS region transcription start site region 133977
Tssr133978 15 34678805 to 34678827 22 - TSS region transcription start site region 133978
Tssr133979 15 34678828 to 34678851 23 - TSS region transcription start site region 133979
Tssr133980 15 34678876 to 34678892 16 - TSS region transcription start site region 133980
Tssr133981 15 34679175 to 34679208 33 - TSS region transcription start site region 133981
Gm32970 15 34744970 to 34838442 93472 - protein coding gene predicted gene, 32970
Gm48932 15 34823180 to 34826429 3249 - unclassified gene predicted gene, 48932
Cpgi7012 15 34837076 to 34838830 1754 CpG island CpG island 7012
Kcns2 15 34837355 to 34843407 6052 + protein coding gene K+ voltage-gated channel, subfamily S, 2
Stk3 15 34875499 to 35155895 280396 - protein coding gene serine/threonine kinase 3
Tssr133982 15 34876210 to 34876228 18 - TSS region transcription start site region 133982
Tssr133983 15 34876330 to 34876341 11 - TSS region transcription start site region 133983
Tssr133984 15 34878822 to 34878832 10 - TSS region transcription start site region 133984
Tssr133985 15 34983344 to 34983356 12 - TSS region transcription start site region 133985
Tssr133986 15 34995289 to 34995292 3 - TSS region transcription start site region 133986
Tssr133987 15 34996083 to 34996119 36 - TSS region transcription start site region 133987
Tssr131043 15 35024027 to 35024069 42 + TSS region transcription start site region 131043
Tssr131044 15 35041205 to 35041207 2 + TSS region transcription start site region 131044
Tssr133988 15 35062367 to 35062390 23 - TSS region transcription start site region 133988
Tssr133989 15 35062396 to 35062407 11 - TSS region transcription start site region 133989