MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:34153527-34384829

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38594	15	34152562 to 34166892	14330	-	lncRNA gene	predicted gene, 38594
Cpgi7006	15	34237784 to 34238904	1120		CpG island	CpG island 7006
Laptm4b	15	34238026 to 34284295	46269	+	protein coding gene	lysosomal-associated protein transmembrane 4B
Tssr131030	15	34238061 to 34238062	1	+	TSS region	transcription start site region 131030
Tssr131031	15	34238108 to 34238177	69	+	TSS region	transcription start site region 131031
Tssr131032	15	34238178 to 34238189	11	+	TSS region	transcription start site region 131032
Tssr131033	15	34238735 to 34238746	11	+	TSS region	transcription start site region 131033
Tssr4575	15	34248731 to 34248737	6	-	TSS region	transcription start site region 4575
Gm18949	15	34268527 to 34269829	1302	-	pseudogene	predicted gene, 18949
Tssr133964	15	34269862 to 34269863	1	-	TSS region	transcription start site region 133964
Gm25809	15	34288819 to 34288870	51	-	snoRNA gene	predicted gene, 25809
D15Mit1004	15	34290327 to 34290459	132		DNA segment	DNA Segment, Chr 15, Massachusetts Institute of Technology 1004
Cpgi7007	15	34306395 to 34307203	808		CpG island	CpG island 7007
Matn2	15	34306654 to 34436242	129588	+	protein coding gene	matrilin 2
Tssr131034	15	34306666 to 34306757	91	+	TSS region	transcription start site region 131034
Tssr131035	15	34306767 to 34306784	17	+	TSS region	transcription start site region 131035
9430069I07Rik	15	34349051 to 34357872	8821	-	protein coding gene	RIKEN cDNA 9430069I07 gene
Opfaq12	15	34358765 to 38447657	4088892		QTL	open field activity QTL 12