Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:34107784-34368904

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mtdh 15 34082719 to 34143537 60818 + protein coding gene metadherin
Tssr131018 15 34123678 to 34123689 11 + TSS region transcription start site region 131018
Tssr131019 15 34123712 to 34123728 16 + TSS region transcription start site region 131019
9930017N22Rik 15 34126944 to 34130688 3744 + unclassified gene RIKEN cDNA 9930017N22 gene
Tssr131020 15 34131153 to 34131187 34 + TSS region transcription start site region 131020
Tssr131021 15 34131213 to 34131250 37 + TSS region transcription start site region 131021
Tssr131022 15 34133505 to 34133554 49 + TSS region transcription start site region 131022
Tssr131023 15 34134315 to 34134324 9 + TSS region transcription start site region 131023
Tssr131024 15 34134359 to 34134401 42 + TSS region transcription start site region 131024
D15Mit55 15 34135807 to 34135910 103 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 55
Gm24500 15 34139253 to 34139376 123 - snoRNA gene predicted gene, 24500
Tssr131025 15 34141125 to 34141167 42 + TSS region transcription start site region 131025
Tssr131026 15 34142522 to 34142530 8 + TSS region transcription start site region 131026
Tssr131027 15 34142960 to 34142965 5 + TSS region transcription start site region 131027
Tssr131028 15 34143061 to 34143104 43 + TSS region transcription start site region 131028
Tssr131029 15 34143921 to 34143928 7 + TSS region transcription start site region 131029
Gm38594 15 34152562 to 34166892 14330 - lncRNA gene predicted gene, 38594
Cpgi7006 15 34237784 to 34238904 1120 CpG island CpG island 7006
Laptm4b 15 34238026 to 34284295 46269 + protein coding gene lysosomal-associated protein transmembrane 4B
Tssr131030 15 34238061 to 34238062 1 + TSS region transcription start site region 131030
Tssr131031 15 34238108 to 34238177 69 + TSS region transcription start site region 131031
Tssr131032 15 34238178 to 34238189 11 + TSS region transcription start site region 131032
Tssr131033 15 34238735 to 34238746 11 + TSS region transcription start site region 131033
Tssr4575 15 34248731 to 34248737 6 - TSS region transcription start site region 4575
Gm18949 15 34268527 to 34269829 1302 - pseudogene predicted gene, 18949
Tssr133964 15 34269862 to 34269863 1 - TSS region transcription start site region 133964
Gm25809 15 34288819 to 34288870 51 - snoRNA gene predicted gene, 25809
D15Mit1004 15 34290327 to 34290459 132 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 1004
Cpgi7007 15 34306395 to 34307203 808 CpG island CpG island 7007
Matn2 15 34306654 to 34436242 129588 + protein coding gene matrilin 2
Tssr131034 15 34306666 to 34306757 91 + TSS region transcription start site region 131034
Tssr131035 15 34306767 to 34306784 17 + TSS region transcription start site region 131035
9430069I07Rik 15 34349051 to 34357872 8821 - protein coding gene RIKEN cDNA 9430069I07 gene
Opfaq12 15 34358765 to 38447657 4088892 QTL open field activity QTL 12