MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 15:33263881-33983436

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpq	15	33083129 to 33594552	511423	+	protein coding gene	carboxypeptidase Q
Tssr131001	15	33282139 to 33282152	13	+	TSS region	transcription start site region 131001
1700084J12Rik	15	33405209 to 33405939	730	-	pseudogene	RIKEN cDNA 1700084J12 gene
Tssr4574	15	33465149 to 33465150	1	+	TSS region	transcription start site region 4574
Cocia16	15	33497411 to 45277417	11780006		QTL	cocaine induced activation 16
Tssr133954	15	33550727 to 33550746	19	-	TSS region	transcription start site region 133954
9430031J08Rik	15	33557051 to 33558236	1185		unclassified gene	RIKEN cDNA 9430031J08 gene
Gm24476	15	33589606 to 33589736	130	-	rRNA gene	predicted gene, 24476
4930592A05Rik	15	33593881 to 33653436	59555	-	antisense lncRNA gene	RIKEN cDNA 4930592A05 gene
5730407I07Rik	15	33597589 to 33599581	1992		protein coding gene	RIKEN cDNA 5730407I07 gene
Tspyl5	15	33683875 to 33687883	4008	-	protein coding gene	testis-specific protein, Y-encoded-like 5
Cpgi7004	15	33687036 to 33688084	1048		CpG island	CpG island 7004
Tssr133955	15	33687804 to 33687835	31	-	TSS region	transcription start site region 133955
Tssr133956	15	33687840 to 33687864	24	-	TSS region	transcription start site region 133956
Gm49088	15	33757470 to 33757789	319	-	pseudogene	predicted gene, 49088
Gm49089	15	33831448 to 33834353	2905	+	unclassified gene	predicted gene, 49089
Tssr131002	15	33861184 to 33861188	4	+	TSS region	transcription start site region 131002
4933414I06Rik	15	33929572 to 33930418	846		unclassified non-coding RNA gene	RIKEN cDNA 4933414I06 gene