Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:33025209-33785939

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sdc2 15 32920723 to 33034721 113998 + protein coding gene syndecan 2
Criq1 15 33033808 to 33033808 0 QTL Citrobacter rodentium infection QTL 1
Gm32764 15 33046574 to 33070155 23581 - lincRNA gene predicted gene, 32764
Tssr133953 15 33073556 to 33073562 6 - TSS region transcription start site region 133953
Tssr130997 15 33083110 to 33083147 37 + TSS region transcription start site region 130997
Cpq 15 33083129 to 33594552 511423 + protein coding gene carboxypeptidase Q
Tssr130998 15 33083154 to 33083166 12 + TSS region transcription start site region 130998
Tssr130999 15 33083213 to 33083295 82 + TSS region transcription start site region 130999
Tssr131000 15 33221380 to 33221391 11 + TSS region transcription start site region 131000
Tssr131001 15 33282139 to 33282152 13 + TSS region transcription start site region 131001
1700084J12Rik 15 33405209 to 33405939 730 - pseudogene RIKEN cDNA 1700084J12 gene
Tssr4574 15 33465149 to 33465150 1 + TSS region transcription start site region 4574
Cocia16 15 33497411 to 45277417 11780006 QTL cocaine induced activation 16
Tssr133954 15 33550727 to 33550746 19 - TSS region transcription start site region 133954
9430031J08Rik 15 33557051 to 33558236 1185 unclassified gene RIKEN cDNA 9430031J08 gene
Gm24476 15 33589606 to 33589736 130 - rRNA gene predicted gene, 24476
4930592A05Rik 15 33593881 to 33653436 59555 - antisense lncRNA gene RIKEN cDNA 4930592A05 gene
5730407I07Rik 15 33597589 to 33599581 1992 protein coding gene RIKEN cDNA 5730407I07 gene
Tspyl5 15 33683875 to 33687883 4008 - protein coding gene testis-specific protein, Y-encoded-like 5
Cpgi7004 15 33687036 to 33688084 1048 CpG island CpG island 7004
Tssr133955 15 33687804 to 33687835 31 - TSS region transcription start site region 133955
Tssr133956 15 33687840 to 33687864 24 - TSS region transcription start site region 133956
Gm49088 15 33757470 to 33757789 319 - pseudogene predicted gene, 49088