Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:32718129-33959552

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41289 15 32757416 to 32773152 15736 - lincRNA gene predicted gene, 41289
Tssr133952 15 32767454 to 32767481 27 - TSS region transcription start site region 133952
Gm32618 15 32778648 to 32795299 16651 + lincRNA gene predicted gene, 32618
Cpgi7002 15 32778787 to 32779221 434 CpG island CpG island 7002
Tssr130989 15 32778900 to 32778932 32 + TSS region transcription start site region 130989
Tssr130990 15 32778934 to 32778959 25 + TSS region transcription start site region 130990
Gm3065 15 32785066 to 32787194 2128 protein coding gene predicted gene 3065
Cpgi7003 15 32920659 to 32921131 472 CpG island CpG island 7003
Sdc2 15 32920723 to 33034721 113998 + protein coding gene syndecan 2
Tssr130991 15 32920782 to 32920826 44 + TSS region transcription start site region 130991
Tssr130992 15 32920837 to 32920848 11 + TSS region transcription start site region 130992
Tssr130993 15 32921080 to 32921096 16 + TSS region transcription start site region 130993
Tssr130994 15 32921104 to 32921123 19 + TSS region transcription start site region 130994
Tssr130995 15 32944359 to 32944363 4 + TSS region transcription start site region 130995
Tssr130996 15 32985577 to 32985609 32 + TSS region transcription start site region 130996
D15Mit204 15 32994484 to 32994622 138 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 204
D15Mit7 15 33016480 to 33016589 109 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 7
Criq1 15 33033808 to 33033808 0 QTL Citrobacter rodentium infection QTL 1
Gm32764 15 33046574 to 33070155 23581 - lincRNA gene predicted gene, 32764
Tssr133953 15 33073556 to 33073562 6 - TSS region transcription start site region 133953
Tssr130997 15 33083110 to 33083147 37 + TSS region transcription start site region 130997
Cpq 15 33083129 to 33594552 511423 + protein coding gene carboxypeptidase Q
Tssr130998 15 33083154 to 33083166 12 + TSS region transcription start site region 130998
Tssr130999 15 33083213 to 33083295 82 + TSS region transcription start site region 130999
Tssr131000 15 33221380 to 33221391 11 + TSS region transcription start site region 131000
Tssr131001 15 33282139 to 33282152 13 + TSS region transcription start site region 131001
1700084J12Rik 15 33405209 to 33405939 730 - pseudogene RIKEN cDNA 1700084J12 gene
Tssr4574 15 33465149 to 33465150 1 + TSS region transcription start site region 4574
Cocia16 15 33497411 to 45277417 11780006 QTL cocaine induced activation 16
Tssr133954 15 33550727 to 33550746 19 - TSS region transcription start site region 133954
9430031J08Rik 15 33557051 to 33558236 1185 unclassified gene RIKEN cDNA 9430031J08 gene
Gm24476 15 33589606 to 33589736 130 - rRNA gene predicted gene, 24476
4930592A05Rik 15 33593881 to 33653436 59555 - antisense lncRNA gene RIKEN cDNA 4930592A05 gene
5730407I07Rik 15 33597589 to 33599581 1992 protein coding gene RIKEN cDNA 5730407I07 gene
Tspyl5 15 33683875 to 33687883 4008 - protein coding gene testis-specific protein, Y-encoded-like 5
Cpgi7004 15 33687036 to 33688084 1048 CpG island CpG island 7004
Tssr133955 15 33687804 to 33687835 31 - TSS region transcription start site region 133955
Tssr133956 15 33687840 to 33687864 24 - TSS region transcription start site region 133956
Gm49088 15 33757470 to 33757789 319 - pseudogene predicted gene, 49088
Gm49089 15 33831448 to 33834353 2905 + unclassified gene predicted gene, 49089
Tssr131002 15 33861184 to 33861188 4 + TSS region transcription start site region 131002
4933414I06Rik 15 33929572 to 33930418 846 unclassified non-coding RNA gene RIKEN cDNA 4933414I06 gene