Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:31561853-32921923

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr130967 15 31565365 to 31565406 41 + TSS region transcription start site region 130967
Cmbl 15 31565389 to 31590119 24730 + protein coding gene carboxymethylenebutenolidase-like (Pseudomonas)
Tssr130968 15 31565410 to 31565425 15 + TSS region transcription start site region 130968
Tssr130969 15 31568817 to 31568848 31 + TSS region transcription start site region 130969
Tssr130970 15 31568851 to 31568925 74 + TSS region transcription start site region 130970
Tssr130971 15 31572160 to 31572175 15 + TSS region transcription start site region 130971
Tssr130972 15 31572179 to 31572197 18 + TSS region transcription start site region 130972
Cct5 15 31590813 to 31601804 10991 - protein coding gene chaperonin containing Tcp1, subunit 5 (epsilon)
Tssr4573 15 31595809 to 31595852 43 - TSS region transcription start site region 4573
Cpgi7000 15 31600886 to 31602631 1745 CpG island CpG island 7000
Tssr133940 15 31601506 to 31601558 52 - TSS region transcription start site region 133940
Tssr133941 15 31601716 to 31601783 67 - TSS region transcription start site region 133941
Tssr133942 15 31601786 to 31601812 26 - TSS region transcription start site region 133942
Atpsckmt 15 31602069 to 31617537 15468 + protein coding gene ATP synthase C subunit lysine N-methyltransferase
Tssr130973 15 31602106 to 31602132 26 + TSS region transcription start site region 130973
Tssr130974 15 31602138 to 31602158 20 + TSS region transcription start site region 130974
Tssr130975 15 31604794 to 31604832 38 + TSS region transcription start site region 130975
Gm49284 15 31621972 to 31624035 2063 + unclassified gene predicted gene, 49284
Gm32383 15 31635718 to 31640458 4740 + lncRNA gene predicted gene, 32383
Gm46522 15 31654770 to 31655566 796 - pseudogene predicted gene, 46522
Gm18003 15 31730899 to 31733638 2739 - pseudogene predicted gene, 18003
Tssr133943 15 31735401 to 31735410 9 - TSS region transcription start site region 133943
Tssr133944 15 31735419 to 31735427 8 - TSS region transcription start site region 133944
D15Mit111.1 15 31927310 to 31927456 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 111.1
D15Mit111 15 31927441 to 31927610 169 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 111
Bbaa14 15 31927441 to 31927610 169 QTL B.burgdorferi-associated arthritis 14
Eila3 15 31927441 to 31927610 169 QTL ethanol induced locomotor activity 3
Nstr2 15 31927441 to 31927610 169 QTL nerve sheath tumor resistance QTL 2
Gm49285 15 32049951 to 32051353 1402 + unclassified gene predicted gene, 49285
Gm32499 15 32156356 to 32240471 84115 + lncRNA gene predicted gene, 32499
Tas2r119 15 32177289 to 32178294 1005 + protein coding gene taste receptor, type 2, member 119
4930518I17Rik 15 32226385 to 32227040 655 + lincRNA gene RIKEN cDNA 4930518I17 gene
Snhg18 15 32240568 to 32244662 4094 - lincRNA gene small nucleolar RNA host gene 18
Snord123 15 32241853 to 32241923 70 - snoRNA gene small nucleolar RNA, C/D box 123
Cpgi7001 15 32244261 to 32246310 2049 CpG island CpG island 7001
Tssr133945 15 32244413 to 32244438 25 - TSS region transcription start site region 133945
Tssr133946 15 32244443 to 32244454 11 - TSS region transcription start site region 133946
Tssr133947 15 32244567 to 32244615 48 - TSS region transcription start site region 133947
Tssr133948 15 32244621 to 32244630 9 - TSS region transcription start site region 133948
Tssr133949 15 32244632 to 32244670 38 - TSS region transcription start site region 133949
Tssr130976 15 32244801 to 32244836 35 + TSS region transcription start site region 130976
Sema5a 15 32244810 to 32696341 451531 + protein coding gene sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
Tssr130977 15 32244865 to 32244874 9 + TSS region transcription start site region 130977
Tssr130978 15 32245114 to 32245128 14 + TSS region transcription start site region 130978
Tssr133950 15 32248652 to 32248653 1 - TSS region transcription start site region 133950
Tssr130979 15 32251815 to 32251818 3 + TSS region transcription start site region 130979
Tssr130980 15 32254815 to 32254819 4 + TSS region transcription start site region 130980
Tssr130981 15 32268138 to 32268143 5 + TSS region transcription start site region 130981
Tssr130982 15 32357145 to 32357173 28 + TSS region transcription start site region 130982
Gm32562 15 32409971 to 32434440 24469 - lncRNA gene predicted gene, 32562
D15Mit137 15 32473727 to 32473866 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 137
Tssr130983 15 32481294 to 32481316 22 + TSS region transcription start site region 130983
Tssr130984 15 32489685 to 32489689 4 + TSS region transcription start site region 130984
D15Mit126 15 32578270 to 32578398 128 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 126
4930465K09Rik 15 32619744 to 32623505 3761 - antisense lncRNA gene RIKEN cDNA 4930465K09 gene
Tssr133951 15 32623501 to 32623508 7 - TSS region transcription start site region 133951
D15Mit54 15 32645197 to 32645324 127 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 54
Bdln2 15 32645197 to 32645324 127 QTL body length 2
Tssr130985 15 32675660 to 32675663 3 + TSS region transcription start site region 130985
Tssr130986 15 32691317 to 32691341 24 + TSS region transcription start site region 130986
Tssr130987 15 32691798 to 32691851 53 + TSS region transcription start site region 130987
Tssr130988 15 32695943 to 32695959 16 + TSS region transcription start site region 130988
Gm41289 15 32757416 to 32773152 15736 - lincRNA gene predicted gene, 41289
Tssr133952 15 32767454 to 32767481 27 - TSS region transcription start site region 133952
Gm32618 15 32778648 to 32795299 16651 + lincRNA gene predicted gene, 32618
Cpgi7002 15 32778787 to 32779221 434 CpG island CpG island 7002
Tssr130989 15 32778900 to 32778932 32 + TSS region transcription start site region 130989
Tssr130990 15 32778934 to 32778959 25 + TSS region transcription start site region 130990
Gm3065 15 32785066 to 32787194 2128 protein coding gene predicted gene 3065
Cpgi7003 15 32920659 to 32921131 472 CpG island CpG island 7003
Sdc2 15 32920723 to 33034721 113998 + protein coding gene syndecan 2
Tssr130991 15 32920782 to 32920826 44 + TSS region transcription start site region 130991
Tssr130992 15 32920837 to 32920848 11 + TSS region transcription start site region 130992
Tssr130993 15 32921080 to 32921096 16 + TSS region transcription start site region 130993
Tssr130994 15 32921104 to 32921123 19 + TSS region transcription start site region 130994
Eae32 15 103517472 to 32578270 -70939202 QTL experimental allergic encephalomyelitis susceptibility 32