Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:31405419-32065427

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41286 15 31401062 to 31408707 7645 - lncRNA gene predicted gene, 41286
Ropn1l 15 31441210 to 31453689 12479 - protein coding gene ropporin 1-like
Gm6361 15 31446383 to 31446817 434 - pseudogene predicted gene 6361
Tssr133927 15 31449039 to 31449065 26 - TSS region transcription start site region 133927
Cpgi6998 15 31453297 to 31453938 641 CpG island CpG island 6998
Tssr133928 15 31453496 to 31453507 11 - TSS region transcription start site region 133928
Tssr133929 15 31453564 to 31453694 130 - TSS region transcription start site region 133929
Gm49208 15 31453738 to 31454901 1163 + bidirectional promoter lncRNA gene predicted gene, 49208
March6 15 31455899 to 31531048 75149 - protein coding gene membrane-associated ring finger (C3HC4) 6
Gm49214 15 31462281 to 31462631 350 + pseudogene predicted gene, 49214
Tssr133930 15 31467907 to 31467921 14 - TSS region transcription start site region 133930
Tssr133931 15 31467938 to 31467952 14 - TSS region transcription start site region 133931
Tssr133932 15 31467971 to 31467980 9 - TSS region transcription start site region 133932
Gm49216 15 31481756 to 31486929 5173 - sense overlapping lncRNA gene predicted gene, 49216
Tssr133933 15 31503539 to 31503542 3 - TSS region transcription start site region 133933
Gm49215 15 31520924 to 31521273 349 - pseudogene predicted gene, 49215
Tssr133934 15 31521345 to 31521349 4 - TSS region transcription start site region 133934
Cpgi6999 15 31530110 to 31531835 1725 CpG island CpG island 6999
Tssr133935 15 31530823 to 31530833 10 - TSS region transcription start site region 133935
Tssr133936 15 31530838 to 31530849 11 - TSS region transcription start site region 133936
Tssr133937 15 31530976 to 31530992 16 - TSS region transcription start site region 133937
Tssr133938 15 31530999 to 31531069 70 - TSS region transcription start site region 133938
Tssr133939 15 31531081 to 31531092 11 - TSS region transcription start site region 133939
Gm41287 15 31531101 to 31545869 14768 + lncRNA gene predicted gene, 41287
Tssr130967 15 31565365 to 31565406 41 + TSS region transcription start site region 130967
Cmbl 15 31565389 to 31590119 24730 + protein coding gene carboxymethylenebutenolidase-like (Pseudomonas)
Tssr130968 15 31565410 to 31565425 15 + TSS region transcription start site region 130968
Tssr130969 15 31568817 to 31568848 31 + TSS region transcription start site region 130969
Tssr130970 15 31568851 to 31568925 74 + TSS region transcription start site region 130970
Tssr130971 15 31572160 to 31572175 15 + TSS region transcription start site region 130971
Tssr130972 15 31572179 to 31572197 18 + TSS region transcription start site region 130972
Cct5 15 31590813 to 31601804 10991 - protein coding gene chaperonin containing Tcp1, subunit 5 (epsilon)
Tssr4573 15 31595809 to 31595852 43 - TSS region transcription start site region 4573
Cpgi7000 15 31600886 to 31602631 1745 CpG island CpG island 7000
Tssr133940 15 31601506 to 31601558 52 - TSS region transcription start site region 133940
Tssr133941 15 31601716 to 31601783 67 - TSS region transcription start site region 133941
Tssr133942 15 31601786 to 31601812 26 - TSS region transcription start site region 133942
Atpsckmt 15 31602069 to 31617537 15468 + protein coding gene ATP synthase C subunit lysine N-methyltransferase
Tssr130973 15 31602106 to 31602132 26 + TSS region transcription start site region 130973
Tssr130974 15 31602138 to 31602158 20 + TSS region transcription start site region 130974
Tssr130975 15 31604794 to 31604832 38 + TSS region transcription start site region 130975
Gm49284 15 31621972 to 31624035 2063 + unclassified gene predicted gene, 49284
Gm32383 15 31635718 to 31640458 4740 + lncRNA gene predicted gene, 32383
Gm46522 15 31654770 to 31655566 796 - pseudogene predicted gene, 46522
Gm18003 15 31730899 to 31733638 2739 - pseudogene predicted gene, 18003
Tssr133943 15 31735401 to 31735410 9 - TSS region transcription start site region 133943
Tssr133944 15 31735419 to 31735427 8 - TSS region transcription start site region 133944
D15Mit111.1 15 31927310 to 31927456 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 111.1
D15Mit111 15 31927441 to 31927610 169 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 111
Nstr2 15 31927441 to 31927610 169 QTL nerve sheath tumor resistance QTL 2
Bbaa14 15 31927441 to 31927610 169 QTL B.burgdorferi-associated arthritis 14
Eila3 15 31927441 to 31927610 169 QTL ethanol induced locomotor activity 3
Gm49285 15 32049951 to 32051353 1402 + unclassified gene predicted gene, 49285