Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:31336756-31631929

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd33b 15 31291478 to 31367726 76248 - protein coding gene ankyrin repeat domain 33B
Tssr130963 15 31337015 to 31337025 10 + TSS region transcription start site region 130963
Tssr133921 15 31338086 to 31338093 7 - TSS region transcription start site region 133921
Tssr133922 15 31338692 to 31338703 11 - TSS region transcription start site region 133922
Tssr4571 15 31338711 to 31338730 19 - TSS region transcription start site region 4571
Tssr130964 15 31338942 to 31338980 38 + TSS region transcription start site region 130964
Tssr130965 15 31339269 to 31339297 28 + TSS region transcription start site region 130965
Tssr4572 15 31342291 to 31342323 32 + TSS region transcription start site region 4572
Cpgi6996 15 31344765 to 31345061 296 CpG island CpG island 6996
Tssr130966 15 31350199 to 31350207 8 + TSS region transcription start site region 130966
Tssr133923 15 31356937 to 31356954 17 - TSS region transcription start site region 133923
Cpgi6997 15 31366120 to 31368111 1991 CpG island CpG island 6997
Tssr133924 15 31367490 to 31367504 14 - TSS region transcription start site region 133924
Tssr133925 15 31367527 to 31367580 53 - TSS region transcription start site region 133925
Tssr133926 15 31367731 to 31367791 60 - TSS region transcription start site region 133926
Gm49300 15 31368362 to 31370305 1943 + unclassified gene predicted gene, 49300
Gm41286 15 31401062 to 31408707 7645 - lncRNA gene predicted gene, 41286
Ropn1l 15 31441210 to 31453689 12479 - protein coding gene ropporin 1-like
Gm6361 15 31446383 to 31446817 434 - pseudogene predicted gene 6361
Tssr133927 15 31449039 to 31449065 26 - TSS region transcription start site region 133927
Cpgi6998 15 31453297 to 31453938 641 CpG island CpG island 6998
Tssr133928 15 31453496 to 31453507 11 - TSS region transcription start site region 133928
Tssr133929 15 31453564 to 31453694 130 - TSS region transcription start site region 133929
Gm49208 15 31453738 to 31454901 1163 + bidirectional promoter lncRNA gene predicted gene, 49208
March6 15 31455899 to 31531048 75149 - protein coding gene membrane-associated ring finger (C3HC4) 6
Gm49214 15 31462281 to 31462631 350 + pseudogene predicted gene, 49214
Tssr133930 15 31467907 to 31467921 14 - TSS region transcription start site region 133930
Tssr133931 15 31467938 to 31467952 14 - TSS region transcription start site region 133931
Tssr133932 15 31467971 to 31467980 9 - TSS region transcription start site region 133932
Gm49216 15 31481756 to 31486929 5173 - sense overlapping lncRNA gene predicted gene, 49216
Tssr133933 15 31503539 to 31503542 3 - TSS region transcription start site region 133933
Gm49215 15 31520924 to 31521273 349 - pseudogene predicted gene, 49215
Tssr133934 15 31521345 to 31521349 4 - TSS region transcription start site region 133934
Cpgi6999 15 31530110 to 31531835 1725 CpG island CpG island 6999
Tssr133935 15 31530823 to 31530833 10 - TSS region transcription start site region 133935
Tssr133936 15 31530838 to 31530849 11 - TSS region transcription start site region 133936
Tssr133937 15 31530976 to 31530992 16 - TSS region transcription start site region 133937
Tssr133938 15 31530999 to 31531069 70 - TSS region transcription start site region 133938
Tssr133939 15 31531081 to 31531092 11 - TSS region transcription start site region 133939
Gm41287 15 31531101 to 31545869 14768 + lncRNA gene predicted gene, 41287
Tssr130967 15 31565365 to 31565406 41 + TSS region transcription start site region 130967
Cmbl 15 31565389 to 31590119 24730 + protein coding gene carboxymethylenebutenolidase-like (Pseudomonas)
Tssr130968 15 31565410 to 31565425 15 + TSS region transcription start site region 130968
Tssr130969 15 31568817 to 31568848 31 + TSS region transcription start site region 130969
Tssr130970 15 31568851 to 31568925 74 + TSS region transcription start site region 130970
Tssr130971 15 31572160 to 31572175 15 + TSS region transcription start site region 130971
Tssr130972 15 31572179 to 31572197 18 + TSS region transcription start site region 130972
Cct5 15 31590813 to 31601804 10991 - protein coding gene chaperonin containing Tcp1, subunit 5 (epsilon)
Tssr4573 15 31595809 to 31595852 43 - TSS region transcription start site region 4573
Cpgi7000 15 31600886 to 31602631 1745 CpG island CpG island 7000
Tssr133940 15 31601506 to 31601558 52 - TSS region transcription start site region 133940
Tssr133941 15 31601716 to 31601783 67 - TSS region transcription start site region 133941
Tssr133942 15 31601786 to 31601812 26 - TSS region transcription start site region 133942
Atpsckmt 15 31602069 to 31617537 15468 + protein coding gene ATP synthase C subunit lysine N-methyltransferase
Tssr130973 15 31602106 to 31602132 26 + TSS region transcription start site region 130973
Tssr130974 15 31602138 to 31602158 20 + TSS region transcription start site region 130974
Tssr130975 15 31604794 to 31604832 38 + TSS region transcription start site region 130975
Gm49284 15 31621972 to 31624035 2063 + unclassified gene predicted gene, 49284