Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:30641300-31282878

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctnnd2 15 30172593 to 31029341 856748 + protein coding gene catenin (cadherin associated protein), delta 2
Tssr130939 15 30646235 to 30646237 2 + TSS region transcription start site region 130939
Cpgi6993 15 30646375 to 30647603 1228 CpG island CpG island 6993
Tssr130940 15 30646514 to 30646572 58 + TSS region transcription start site region 130940
Tssr130941 15 30646582 to 30646599 17 + TSS region transcription start site region 130941
Tssr130942 15 30646667 to 30646686 19 + TSS region transcription start site region 130942
Tssr130943 15 30646703 to 30646716 13 + TSS region transcription start site region 130943
Tssr130944 15 30646733 to 30646775 42 + TSS region transcription start site region 130944
Tssr130945 15 30646847 to 30646911 64 + TSS region transcription start site region 130945
Tssr130946 15 30646936 to 30646956 20 + TSS region transcription start site region 130946
Tssr130947 15 30647008 to 30647084 76 + TSS region transcription start site region 130947
Gm31841 15 30673142 to 30675474 2332 - lncRNA gene predicted gene, 31841
Gm41283 15 30721681 to 30732723 11042 + lncRNA gene predicted gene, 41283
Tssr130948 15 30730205 to 30730211 6 + TSS region transcription start site region 130948
Pheo 15 30846860 to 30847002 142 QTL pheomelanin
D15Mit136 15 30846860 to 30847002 142 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 136
Yv 15 30846860 to 30847002 142 QTL yellow value
9630009A06Rik 15 30961300 to 30962878 1578 - antisense lncRNA gene RIKEN cDNA 9630009A06 gene
D15Mit202 15 30995683 to 30995798 115 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 202
Tssr130949 15 31004772 to 31004798 26 + TSS region transcription start site region 130949
Tssr130950 15 31027774 to 31027780 6 + TSS region transcription start site region 130950
4930430F21Rik 15 31039128 to 31043331 4203 + lincRNA gene RIKEN cDNA 4930430F21 gene
Gm32011 15 31092220 to 31117266 25046 + lncRNA gene predicted gene, 32011
Tssr130951 15 31103305 to 31103309 4 + TSS region transcription start site region 130951
Gm32070 15 31131006 to 31135849 4843 - lncRNA gene predicted gene, 32070
Gm26416 15 31194205 to 31194338 133 - snoRNA gene predicted gene, 26416
Cpgi6994 15 31223666 to 31224802 1136 CpG island CpG island 6994
Tssr130952 15 31224371 to 31224400 29 + TSS region transcription start site region 130952
Dap 15 31224385 to 31274338 49953 + protein coding gene death-associated protein
Tssr130953 15 31224406 to 31224530 124 + TSS region transcription start site region 130953
Tssr133915 15 31224759 to 31224767 8 - TSS region transcription start site region 133915
Tssr130954 15 31225117 to 31225138 21 + TSS region transcription start site region 130954
Tssr130955 15 31225156 to 31225196 40 + TSS region transcription start site region 130955
Tssr130956 15 31235783 to 31235805 22 + TSS region transcription start site region 130956
D15Mit99 15 31238643 to 31238723 80 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 99
Gm41285 15 31254916 to 31263456 8540 - lncRNA gene predicted gene, 41285
Tssr133916 15 31268191 to 31268218 27 - TSS region transcription start site region 133916
Tssr130957 15 31268262 to 31268266 4 + TSS region transcription start site region 130957
Tssr130958 15 31268272 to 31268290 18 + TSS region transcription start site region 130958
Tssr130959 15 31268293 to 31268323 30 + TSS region transcription start site region 130959
Tssr130960 15 31273192 to 31273218 26 + TSS region transcription start site region 130960
Fam136b-ps 15 31276491 to 31276902 411 + pseudogene family with sequence similarity 136, member B, pseudogene
Gm49296 15 31282089 to 31283136 1047 + unclassified gene predicted gene, 49296