Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:28157467-30590533

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Toa1 15 20807266 to 28493921 7686655 QTL testicular oocyte appearance 1
Gm49234 15 28190894 to 28192122 1228 - unclassified gene predicted gene, 49234
Tssr130908 15 28203726 to 28203742 16 + TSS region transcription start site region 130908
Dnah5 15 28203752 to 28472052 268300 + protein coding gene dynein, axonemal, heavy chain 5
Tssr130909 15 28203799 to 28203811 12 + TSS region transcription start site region 130909
Tssr133912 15 28229877 to 28229891 14 - TSS region transcription start site region 133912
Tssr130910 15 28325850 to 28325853 3 + TSS region transcription start site region 130910
D15Mit18 15 28493790 to 28493921 131 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 18
Gm49278 15 28504755 to 28505191 436 - pseudogene predicted gene, 49278
Gm49279 15 28540214 to 28540471 257 - pseudogene predicted gene, 49279
Tssr130911 15 28576471 to 28576478 7 + TSS region transcription start site region 130911
D15Mit21 15 28626204 to 28626305 101 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 21
Tssr4568 15 28698042 to 28698044 2 + TSS region transcription start site region 4568
Gm8484 15 28718667 to 28720086 1419 - pseudogene predicted gene 8484
Tssr130912 15 28823513 to 28823516 3 + TSS region transcription start site region 130912
Gm49280 15 28855004 to 28857772 2768 + unclassified gene predicted gene, 49280
Gm31687 15 28858890 to 28874657 15767 + lncRNA gene predicted gene, 31687
D15Mit276 15 29103755 to 29103890 135 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-276
D15Mit82 15 29242680 to 29242830 150 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 82
Gm41281 15 29372467 to 29375533 3066 - lncRNA gene predicted gene, 41281
Cpgi6991 15 29386930 to 29387140 210 CpG island CpG island 6991
Tssr4569 15 29506445 to 29506446 1 - TSS region transcription start site region 4569
D15Mit201 15 29512834 to 29512932 98 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 201
Mir3964 15 29713331 to 29713404 73 - miRNA gene microRNA 3964
Gm23033 15 29888341 to 29888474 133 - snoRNA gene predicted gene, 23033
Gm49281 15 29948277 to 29948370 93 - pseudogene predicted gene, 49281
Gm24554 15 30004062 to 30004134 72 - snoRNA gene predicted gene, 24554
Gm23327 15 30004186 to 30004263 77 - snoRNA gene predicted gene, 23327
Gm5212 15 30012294 to 30013065 771 + pseudogene predicted gene 5212
Tssr4570 15 30033556 to 30033582 26 + TSS region transcription start site region 4570
Gm26163 15 30052379 to 30052556 177 - snoRNA gene predicted gene, 26163
Cpgi6992 15 30172213 to 30173667 1454 CpG island CpG island 6992
Tssr130913 15 30172519 to 30172567 48 + TSS region transcription start site region 130913
Tssr130914 15 30172570 to 30172600 30 + TSS region transcription start site region 130914
Ctnnd2 15 30172593 to 31029341 856748 + protein coding gene catenin (cadherin associated protein), delta 2
Tssr130915 15 30172654 to 30172665 11 + TSS region transcription start site region 130915
Tssr130916 15 30172678 to 30172731 53 + TSS region transcription start site region 130916
Tssr130917 15 30172741 to 30172768 27 + TSS region transcription start site region 130917
Tssr130918 15 30172922 to 30172938 16 + TSS region transcription start site region 130918
Tssr130919 15 30172943 to 30172970 27 + TSS region transcription start site region 130919
Tssr130920 15 30172977 to 30173000 23 + TSS region transcription start site region 130920
Tssr130921 15 30173083 to 30173114 31 + TSS region transcription start site region 130921
Gm31953 15 30173194 to 30186824 13630 + lncRNA gene predicted gene, 31953
Tssr133913 15 30173491 to 30173496 5 - TSS region transcription start site region 133913
Tssr130922 15 30184751 to 30184755 4 + TSS region transcription start site region 130922
Tssr130923 15 30187959 to 30187964 5 + TSS region transcription start site region 130923
D15Mit249 15 30239353 to 30239623 270 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-249
D15Mit98 15 30273538 to 30273687 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 98
Tssr130924 15 30303451 to 30303454 3 + TSS region transcription start site region 130924
Tssr130925 15 30333207 to 30333214 7 + TSS region transcription start site region 130925
Tssr130926 15 30333831 to 30333848 17 + TSS region transcription start site region 130926
Tssr130927 15 30338455 to 30338458 3 + TSS region transcription start site region 130927
D15Mit131 15 30374203 to 30374342 139 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 131
Gm49283 15 30428844 to 30430233 1389 + unclassified gene predicted gene, 49283
Tssr130928 15 30457591 to 30457599 8 + TSS region transcription start site region 130928
Tssr130929 15 30457627 to 30457710 83 + TSS region transcription start site region 130929
Tssr130930 15 30457851 to 30457868 17 + TSS region transcription start site region 130930
Tssr133914 15 30458815 to 30458840 25 - TSS region transcription start site region 133914
Tssr130931 15 30485863 to 30485880 17 + TSS region transcription start site region 130931
Tssr130932 15 30496802 to 30496808 6 + TSS region transcription start site region 130932
Tssr130933 15 30498580 to 30498583 3 + TSS region transcription start site region 130933
Tssr130934 15 30500579 to 30500584 5 + TSS region transcription start site region 130934
Gm41284 15 30516933 to 30534114 17181 + lncRNA gene predicted gene, 41284
Tssr130935 15 30539583 to 30539596 13 + TSS region transcription start site region 130935
D15Mit203 15 30589760 to 30589835 75 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 203
Gm23956 15 30590287 to 30590405 118 + rRNA gene predicted gene, 23956