Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:28028790-28958921

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Toa1 15 20807266 to 28493921 7686655 QTL testicular oocyte appearance 1
Gm41280 15 28027388 to 28031152 3764 + lncRNA gene predicted gene, 41280
Gm19883 15 28041009 to 28041489 480 + pseudogene predicted gene, 19883
Gm31458 15 28045928 to 28066685 20757 - lincRNA gene predicted gene, 31458
Tssr133910 15 28058919 to 28058922 3 - TSS region transcription start site region 133910
Tssr133911 15 28066665 to 28066674 9 - TSS region transcription start site region 133911
Tssr130906 15 28081468 to 28081473 5 + TSS region transcription start site region 130906
Gm8472 15 28123259 to 28123621 362 - pseudogene predicted gene 8472
D15Mit163 15 28153198 to 28153460 262 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 163
D15Mit163.2 15 28153389 to 28153506 117 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 163.2
Gm49233 15 28154101 to 28155462 1361 - lincRNA gene predicted gene, 49233
Cpgi6990 15 28154820 to 28155195 375 CpG island CpG island 6990
Tssr130907 15 28154925 to 28154968 43 + TSS region transcription start site region 130907
Gm49234 15 28190894 to 28192122 1228 - unclassified gene predicted gene, 49234
Tssr130908 15 28203726 to 28203742 16 + TSS region transcription start site region 130908
Dnah5 15 28203752 to 28472052 268300 + protein coding gene dynein, axonemal, heavy chain 5
Tssr130909 15 28203799 to 28203811 12 + TSS region transcription start site region 130909
Tssr133912 15 28229877 to 28229891 14 - TSS region transcription start site region 133912
Tssr130910 15 28325850 to 28325853 3 + TSS region transcription start site region 130910
D15Mit18 15 28493790 to 28493921 131 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 18
Gm49278 15 28504755 to 28505191 436 - pseudogene predicted gene, 49278
Gm49279 15 28540214 to 28540471 257 - pseudogene predicted gene, 49279
Tssr130911 15 28576471 to 28576478 7 + TSS region transcription start site region 130911
D15Mit21 15 28626204 to 28626305 101 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 21
Tssr4568 15 28698042 to 28698044 2 + TSS region transcription start site region 4568
Gm8484 15 28718667 to 28720086 1419 - pseudogene predicted gene 8484
Tssr130912 15 28823513 to 28823516 3 + TSS region transcription start site region 130912
Gm49280 15 28855004 to 28857772 2768 + unclassified gene predicted gene, 49280
Gm31687 15 28858890 to 28874657 15767 + lncRNA gene predicted gene, 31687