Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:27586613-28066618

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ank 15 27466677 to 27594909 128232 + protein coding gene progressive ankylosis
Otulin 15 27605917 to 27630980 25063 - protein coding gene OTU deubiquitinase with linear linkage specificity
Tssr133864 15 27619267 to 27619295 28 - TSS region transcription start site region 133864
Cpgi6983 15 27630022 to 27631186 1164 CpG island CpG island 6983
Tssr133865 15 27630644 to 27630714 70 - TSS region transcription start site region 133865
Tssr130893 15 27636477 to 27636481 4 + TSS region transcription start site region 130893
Gm46506 15 27636511 to 27636895 384 + pseudogene predicted gene, 46506
Tssr130894 15 27641471 to 27641482 11 + TSS region transcription start site region 130894
Otulinl 15 27655069 to 27681579 26510 - protein coding gene OTU deubiquitinase with linear linkage specificity like
Tssr133866 15 27661550 to 27661551 1 - TSS region transcription start site region 133866
Tssr133867 15 27663332 to 27663388 56 - TSS region transcription start site region 133867
Tssr133868 15 27663422 to 27663440 18 - TSS region transcription start site region 133868
Tssr133869 15 27663493 to 27663518 25 - TSS region transcription start site region 133869
Tssr133870 15 27663553 to 27663564 11 - TSS region transcription start site region 133870
Tssr133871 15 27663636 to 27663649 13 - TSS region transcription start site region 133871
Tssr133872 15 27664367 to 27664380 13 - TSS region transcription start site region 133872
Cpgi6984 15 27665382 to 27665760 378 CpG island CpG island 6984
Tssr133873 15 27670942 to 27670955 13 - TSS region transcription start site region 133873
C130098B18Rik 15 27677356 to 27680082 2726 unclassified gene RIKEN cDNA C130098B18 gene
Tssr133874 15 27680117 to 27680158 41 - TSS region transcription start site region 133874
Cpgi6985 15 27680704 to 27682030 1326 CpG island CpG island 6985
Tssr133875 15 27681484 to 27681495 11 - TSS region transcription start site region 133875
Tssr133876 15 27681498 to 27681554 56 - TSS region transcription start site region 133876
Tssr133877 15 27681573 to 27681584 11 - TSS region transcription start site region 133877
Tssr130895 15 27681664 to 27681676 12 + TSS region transcription start site region 130895
Tssr133878 15 27697733 to 27697746 13 - TSS region transcription start site region 133878
Tssr133879 15 27697775 to 27697794 19 - TSS region transcription start site region 133879
Trio 15 27730651 to 28025848 295197 - protein coding gene triple functional domain (PTPRF interacting)
Tssr130896 15 27741194 to 27741198 4 + TSS region transcription start site region 130896
Cpgi6986 15 27747654 to 27748121 467 CpG island CpG island 6986
Tssr133880 15 27755472 to 27755478 6 - TSS region transcription start site region 133880
Tssr133881 15 27763052 to 27763059 7 - TSS region transcription start site region 133881
Tssr130897 15 27770969 to 27770978 9 + TSS region transcription start site region 130897
Tssr130898 15 27770985 to 27770996 11 + TSS region transcription start site region 130898
Tssr130899 15 27771094 to 27771111 17 + TSS region transcription start site region 130899
Tssr133882 15 27772247 to 27772264 17 - TSS region transcription start site region 133882
Tssr133883 15 27785376 to 27785388 12 - TSS region transcription start site region 133883
Tssr133884 15 27788247 to 27788258 11 - TSS region transcription start site region 133884
Tssr133885 15 27788312 to 27788421 109 - TSS region transcription start site region 133885
Tssr133886 15 27788513 to 27788525 12 - TSS region transcription start site region 133886
Tssr133887 15 27788540 to 27788558 18 - TSS region transcription start site region 133887
Tssr133888 15 27788570 to 27788589 19 - TSS region transcription start site region 133888
Tssr133889 15 27788607 to 27788618 11 - TSS region transcription start site region 133889
Tssr130900 15 27796215 to 27796223 8 + TSS region transcription start site region 130900
Tssr130901 15 27796797 to 27796824 27 + TSS region transcription start site region 130901
Tssr130902 15 27826613 to 27826618 5 + TSS region transcription start site region 130902
Tssr133890 15 27840668 to 27840671 3 - TSS region transcription start site region 133890
Tssr4567 15 27855698 to 27855723 25 + TSS region transcription start site region 4567
Cpgi6987 15 27856131 to 27856701 570 CpG island CpG island 6987
Gm9891 15 27856307 to 27857113 806 + protein coding gene predicted gene 9891
Tssr133891 15 27856427 to 27856463 36 - TSS region transcription start site region 133891
Tssr133892 15 27856466 to 27856485 19 - TSS region transcription start site region 133892
Gm20555 15 27863799 to 27867231 3432 - unclassified gene predicted gene, 20555
Tssr133893 15 27876455 to 27876478 23 - TSS region transcription start site region 133893
Tssr133894 15 27876479 to 27876524 45 - TSS region transcription start site region 133894
Cpgi6988 15 27923660 to 27923922 262 CpG island CpG island 6988
Tssr133895 15 27923692 to 27923739 47 - TSS region transcription start site region 133895
Tssr130903 15 27924243 to 27924256 13 + TSS region transcription start site region 130903
Tssr130904 15 27924296 to 27924309 13 + TSS region transcription start site region 130904
D15Mit45 15 27967386 to 27967550 164 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 45
Tssr133896 15 27968201 to 27968212 11 - TSS region transcription start site region 133896
Tssr133897 15 27968228 to 27968240 12 - TSS region transcription start site region 133897
Tssr133898 15 27968260 to 27968267 7 - TSS region transcription start site region 133898
Tssr130905 15 27968374 to 27968384 10 + TSS region transcription start site region 130905
Gm29975 15 27970010 to 27988987 18977 - protein coding gene predicted gene, 29975
Tssr133899 15 27984779 to 27984783 4 - TSS region transcription start site region 133899
Tssr133900 15 27995320 to 27995338 18 - TSS region transcription start site region 133900
Tssr133901 15 28022187 to 28022190 3 - TSS region transcription start site region 133901
Cpgi6989 15 28023994 to 28026457 2463 CpG island CpG island 6989
Tssr133902 15 28024457 to 28024473 16 - TSS region transcription start site region 133902
Tssr133903 15 28025834 to 28025879 45 - TSS region transcription start site region 133903
Tssr133904 15 28025894 to 28025924 30 - TSS region transcription start site region 133904
Tssr133905 15 28025926 to 28025950 24 - TSS region transcription start site region 133905
Tssr133906 15 28025952 to 28025965 13 - TSS region transcription start site region 133906
Tssr133907 15 28025967 to 28025981 14 - TSS region transcription start site region 133907
Tssr133908 15 28025982 to 28026001 19 - TSS region transcription start site region 133908
Tssr133909 15 28026010 to 28026021 11 - TSS region transcription start site region 133909
Gm41280 15 28027388 to 28031152 3764 + lncRNA gene predicted gene, 41280
Gm19883 15 28041009 to 28041489 480 + pseudogene predicted gene, 19883
Gm31458 15 28045928 to 28066685 20757 - lincRNA gene predicted gene, 31458
Tssr133910 15 28058919 to 28058922 3 - TSS region transcription start site region 133910