Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:26245949-27545967

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6976 15 26308452 to 26309929 1477 CpG island CpG island 6976
Tssr130873 15 26308791 to 26308800 9 + TSS region transcription start site region 130873
Tssr130874 15 26308861 to 26308875 14 + TSS region transcription start site region 130874
Tssr130875 15 26309020 to 26309026 6 + TSS region transcription start site region 130875
Tssr130876 15 26309039 to 26309055 16 + TSS region transcription start site region 130876
March11 15 26309048 to 26409576 100528 + protein coding gene membrane-associated ring finger (C3HC4) 11
Tssr130877 15 26362200 to 26362201 1 + TSS region transcription start site region 130877
Tssr133851 15 26402284 to 26402303 19 - TSS region transcription start site region 133851
Tssr133852 15 26402310 to 26402317 7 - TSS region transcription start site region 133852
Gm36790 15 26448793 to 26462193 13400 + lncRNA gene predicted gene, 36790
Fbxl7 15 26540454 to 26895564 355110 - protein coding gene F-box and leucine-rich repeat protein 7
Cpgi6977 15 26543233 to 26543832 599 CpG island CpG island 6977
Cpgi6978 15 26552670 to 26552962 292 CpG island CpG island 6978
Gm49267 15 26609503 to 26644048 34545 + antisense lncRNA gene predicted gene, 49267
Tssr4565 15 26610797 to 26610801 4 - TSS region transcription start site region 4565
D15Mit135 15 26637316 to 26637462 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 135
Tssr133853 15 26639527 to 26639528 1 - TSS region transcription start site region 133853
9430068D22Rik 15 26644635 to 26645289 654 - unclassified gene RIKEN cDNA 9430068D22 gene
Gm49265 15 26672937 to 26674753 1816 - unclassified gene predicted gene, 49265
Gm49268 15 26688400 to 26691667 3267 + unclassified gene predicted gene, 49268
9430091N11Rik 15 26696429 to 26698544 2115 unclassified gene RIKEN cDNA 9430091N11 gene
Tssr133854 15 26705750 to 26705754 4 - TSS region transcription start site region 133854
Tssr133855 15 26715354 to 26715367 13 - TSS region transcription start site region 133855
Gm6330 15 26728287 to 26729716 1429 - pseudogene predicted gene 6330
Gm49266 15 26743232 to 26746137 2905 - unclassified gene predicted gene, 49266
Tssr133856 15 26743506 to 26743519 13 - TSS region transcription start site region 133856
Tssr133857 15 26743559 to 26743570 11 - TSS region transcription start site region 133857
Tssr133858 15 26761570 to 26761575 5 - TSS region transcription start site region 133858
Gm18684 15 26775051 to 26776472 1421 + pseudogene predicted gene, 18684
Gm18093 15 26784231 to 26785059 828 + pseudogene predicted gene, 18093
Tssr133859 15 26816527 to 26816541 14 - TSS region transcription start site region 133859
Cpgi6979 15 26894771 to 26896086 1315 CpG island CpG island 6979
Tssr133860 15 26895539 to 26895558 19 - TSS region transcription start site region 133860
Tssr133861 15 26895578 to 26895585 7 - TSS region transcription start site region 133861
Tssr133862 15 26895949 to 26895967 18 - TSS region transcription start site region 133862
Tssr130878 15 26974234 to 26974241 7 + TSS region transcription start site region 130878
Tssr130879 15 27025296 to 27025298 2 + TSS region transcription start site region 130879
Gm6576 15 27025328 to 27026210 882 + pseudogene predicted gene 6576
Gm23903 15 27061736 to 27061866 130 - snoRNA gene predicted gene, 23903
Cpgi6980 15 27208278 to 27208477 199 CpG island CpG island 6980
Gm19111 15 27367939 to 27368990 1051 + pseudogene predicted gene, 19111
D15Mit94 15 27443957 to 27444106 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 94
Gm36899 15 27460088 to 27462835 2747 - lincRNA gene predicted gene, 36899
Cpgi6981 15 27466055 to 27467501 1446 CpG island CpG island 6981
Tssr130880 15 27466597 to 27466608 11 + TSS region transcription start site region 130880
Tssr130881 15 27466647 to 27466696 49 + TSS region transcription start site region 130881
Ank 15 27466677 to 27594909 128232 + protein coding gene progressive ankylosis
Tssr130882 15 27466700 to 27466721 21 + TSS region transcription start site region 130882
Tssr130883 15 27466781 to 27466798 17 + TSS region transcription start site region 130883
Tssr130884 15 27466812 to 27466828 16 + TSS region transcription start site region 130884
Tssr130885 15 27466837 to 27466862 25 + TSS region transcription start site region 130885
Cpgi6982 15 27476484 to 27476649 165 CpG island CpG island 6982
Tiaf2 15 27479006 to 27480902 1896 + unclassified gene TGF-beta1-induced anti-apoptotic factor 2
Tssr130886 15 27488261 to 27488301 40 + TSS region transcription start site region 130886
B230362B09Rik 15 27503912 to 27505532 1620 + unclassified gene RIKEN cDNA B230362B09 gene
D15Ertd30e 15 27509354 to 27509589 235 DNA segment DNA segment, Chr 15, ERATO Doi 30, expressed
Gm29901 15 27516350 to 27517352 1002 - lncRNA gene predicted gene, 29901
Tssr133863 15 27518761 to 27518767 6 - TSS region transcription start site region 133863