Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:25882937-27464753

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Retreg1 15 25843298 to 25973696 130398 + protein coding gene reticulophagy regulator 1
Cpgi6974 15 25897721 to 25897982 261 CpG island CpG island 6974
Tssr130849 15 25910067 to 25910076 9 + TSS region transcription start site region 130849
Tssr130850 15 25910352 to 25910383 31 + TSS region transcription start site region 130850
Tssr130851 15 25910464 to 25910490 26 + TSS region transcription start site region 130851
Tssr130852 15 25910498 to 25910514 16 + TSS region transcription start site region 130852
Tssr130853 15 25933546 to 25933580 34 + TSS region transcription start site region 130853
Tssr130854 15 25940696 to 25940732 36 + TSS region transcription start site region 130854
Tssr4564 15 25940800 to 25940809 9 + TSS region transcription start site region 4564
Tssr130855 15 25940832 to 25940843 11 + TSS region transcription start site region 130855
Tssr130856 15 25940846 to 25940934 88 + TSS region transcription start site region 130856
Tssr130857 15 25940980 to 25940997 17 + TSS region transcription start site region 130857
Tssr130858 15 25941003 to 25941014 11 + TSS region transcription start site region 130858
Tssr130859 15 25941017 to 25941024 7 + TSS region transcription start site region 130859
Tssr130860 15 25941029 to 25941047 18 + TSS region transcription start site region 130860
Tssr130861 15 25941054 to 25941068 14 + TSS region transcription start site region 130861
Tssr130862 15 25941078 to 25941089 11 + TSS region transcription start site region 130862
Tssr130863 15 25941108 to 25941129 21 + TSS region transcription start site region 130863
Tssr130864 15 25941144 to 25941155 11 + TSS region transcription start site region 130864
Mir7212 15 25948227 to 25948287 60 + miRNA gene microRNA 7212
D15Mit253 15 25958454 to 25958542 88 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 253
Tssr130865 15 25971907 to 25971912 5 + TSS region transcription start site region 130865
Tssr130866 15 25971979 to 25971991 12 + TSS region transcription start site region 130866
Cpgi6975 15 25983980 to 25985448 1468 CpG island CpG island 6975
Tssr130867 15 25984333 to 25984336 3 + TSS region transcription start site region 130867
Tssr130868 15 25984359 to 25984373 14 + TSS region transcription start site region 130868
Zfp622 15 25984366 to 25998481 14115 + protein coding gene zinc finger protein 622
Tssr130869 15 25984383 to 25984391 8 + TSS region transcription start site region 130869
Tssr130870 15 25984397 to 25984451 54 + TSS region transcription start site region 130870
Tssr130871 15 25984462 to 25984477 15 + TSS region transcription start site region 130871
Tssr130872 15 25984480 to 25984491 11 + TSS region transcription start site region 130872
Dob9 15 26035594 to 37781057 11745463 QTL dietary obesity 9
D15Mit9 15 26035594 to 26035731 137 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 9
Gm41279 15 26054365 to 26062438 8073 - lincRNA gene predicted gene, 41279
Tssr133850 15 26062513 to 26062537 24 - TSS region transcription start site region 133850
Cpgi6976 15 26308452 to 26309929 1477 CpG island CpG island 6976
Tssr130873 15 26308791 to 26308800 9 + TSS region transcription start site region 130873
Tssr130874 15 26308861 to 26308875 14 + TSS region transcription start site region 130874
Tssr130875 15 26309020 to 26309026 6 + TSS region transcription start site region 130875
Tssr130876 15 26309039 to 26309055 16 + TSS region transcription start site region 130876
March11 15 26309048 to 26409576 100528 + protein coding gene membrane-associated ring finger (C3HC4) 11
Tssr130877 15 26362200 to 26362201 1 + TSS region transcription start site region 130877
Tssr133851 15 26402284 to 26402303 19 - TSS region transcription start site region 133851
Tssr133852 15 26402310 to 26402317 7 - TSS region transcription start site region 133852
Gm36790 15 26448793 to 26462193 13400 + lncRNA gene predicted gene, 36790
Fbxl7 15 26540454 to 26895564 355110 - protein coding gene F-box and leucine-rich repeat protein 7
Cpgi6977 15 26543233 to 26543832 599 CpG island CpG island 6977
Cpgi6978 15 26552670 to 26552962 292 CpG island CpG island 6978
Gm49267 15 26609503 to 26644048 34545 + antisense lncRNA gene predicted gene, 49267
Tssr4565 15 26610797 to 26610801 4 - TSS region transcription start site region 4565
D15Mit135 15 26637316 to 26637462 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 135
Tssr133853 15 26639527 to 26639528 1 - TSS region transcription start site region 133853
9430068D22Rik 15 26644635 to 26645289 654 - unclassified gene RIKEN cDNA 9430068D22 gene
Gm49265 15 26672937 to 26674753 1816 - unclassified gene predicted gene, 49265
Gm49268 15 26688400 to 26691667 3267 + unclassified gene predicted gene, 49268
9430091N11Rik 15 26696429 to 26698544 2115 unclassified gene RIKEN cDNA 9430091N11 gene
Tssr133854 15 26705750 to 26705754 4 - TSS region transcription start site region 133854
Tssr133855 15 26715354 to 26715367 13 - TSS region transcription start site region 133855
Gm6330 15 26728287 to 26729716 1429 - pseudogene predicted gene 6330
Gm49266 15 26743232 to 26746137 2905 - unclassified gene predicted gene, 49266
Tssr133856 15 26743506 to 26743519 13 - TSS region transcription start site region 133856
Tssr133857 15 26743559 to 26743570 11 - TSS region transcription start site region 133857
Tssr133858 15 26761570 to 26761575 5 - TSS region transcription start site region 133858
Gm18684 15 26775051 to 26776472 1421 + pseudogene predicted gene, 18684
Gm18093 15 26784231 to 26785059 828 + pseudogene predicted gene, 18093
Tssr133859 15 26816527 to 26816541 14 - TSS region transcription start site region 133859
Cpgi6979 15 26894771 to 26896086 1315 CpG island CpG island 6979
Tssr133860 15 26895539 to 26895558 19 - TSS region transcription start site region 133860
Tssr133861 15 26895578 to 26895585 7 - TSS region transcription start site region 133861
Tssr133862 15 26895949 to 26895967 18 - TSS region transcription start site region 133862
Tssr130878 15 26974234 to 26974241 7 + TSS region transcription start site region 130878
Tssr130879 15 27025296 to 27025298 2 + TSS region transcription start site region 130879
Gm6576 15 27025328 to 27026210 882 + pseudogene predicted gene 6576
Gm23903 15 27061736 to 27061866 130 - snoRNA gene predicted gene, 23903
Cpgi6980 15 27208278 to 27208477 199 CpG island CpG island 6980
Gm19111 15 27367939 to 27368990 1051 + pseudogene predicted gene, 19111
D15Mit94 15 27443957 to 27444106 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 94
Gm36899 15 27460088 to 27462835 2747 - lincRNA gene predicted gene, 36899