Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:25621837-29311862

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275 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Toa1 15 20807266 to 28493921 7686655 QTL testicular oocyte appearance 1
Cpgi6969 15 25621989 to 25623493 1504 CpG island CpG island 6969
Tssr130804 15 25622525 to 25622558 33 + TSS region transcription start site region 130804
Myo10 15 25622550 to 25813671 191121 + protein coding gene myosin X
Tssr130805 15 25622566 to 25622581 15 + TSS region transcription start site region 130805
Tssr130806 15 25622747 to 25622754 7 + TSS region transcription start site region 130806
Tssr130807 15 25622759 to 25622777 18 + TSS region transcription start site region 130807
Tssr130808 15 25626182 to 25626207 25 + TSS region transcription start site region 130808
Tssr130809 15 25626221 to 25626233 12 + TSS region transcription start site region 130809
Tssr130810 15 25626417 to 25626440 23 + TSS region transcription start site region 130810
Tssr130811 15 25626449 to 25626472 23 + TSS region transcription start site region 130811
Tssr130812 15 25632332 to 25632341 9 + TSS region transcription start site region 130812
Gm48996 15 25634627 to 25638243 3616 + unclassified gene predicted gene, 48996
Tssr130813 15 25655135 to 25655166 31 + TSS region transcription start site region 130813
Tssr130814 15 25655263 to 25655272 9 + TSS region transcription start site region 130814
Gm2862 15 25681798 to 25682125 327 + pseudogene predicted gene 2862
D15Mit127 15 25686036 to 25686171 135 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 127
Tssr130815 15 25708263 to 25708268 5 + TSS region transcription start site region 130815
Cpgi6970 15 25713686 to 25714383 697 CpG island CpG island 6970
Tssr130816 15 25713870 to 25713885 15 + TSS region transcription start site region 130816
Tssr130817 15 25724811 to 25724822 11 + TSS region transcription start site region 130817
Tssr130818 15 25726627 to 25726630 3 + TSS region transcription start site region 130818
Tssr130819 15 25742314 to 25742322 8 + TSS region transcription start site region 130819
Tssr130820 15 25749953 to 25749980 27 + TSS region transcription start site region 130820
Tssr133842 15 25751611 to 25751620 9 - TSS region transcription start site region 133842
Tssr130821 15 25751787 to 25751799 12 + TSS region transcription start site region 130821
Tssr130822 15 25752860 to 25752897 37 + TSS region transcription start site region 130822
Tssr130823 15 25753198 to 25753212 14 + TSS region transcription start site region 130823
Tssr130824 15 25753230 to 25753241 11 + TSS region transcription start site region 130824
Tssr133843 15 25754006 to 25754016 10 - TSS region transcription start site region 133843
Tssr130825 15 25754784 to 25754796 12 + TSS region transcription start site region 130825
Tssr130826 15 25754821 to 25754838 17 + TSS region transcription start site region 130826
Tssr130827 15 25754871 to 25754898 27 + TSS region transcription start site region 130827
Tssr130828 15 25755243 to 25755248 5 + TSS region transcription start site region 130828
Tssr130829 15 25758755 to 25758776 21 + TSS region transcription start site region 130829
Tssr130830 15 25758779 to 25758793 14 + TSS region transcription start site region 130830
Tssr133844 15 25765077 to 25765115 38 - TSS region transcription start site region 133844
Tssr133845 15 25766584 to 25766595 11 - TSS region transcription start site region 133845
Tssr130831 15 25773985 to 25774042 57 + TSS region transcription start site region 130831
Tssr130832 15 25774072 to 25774092 20 + TSS region transcription start site region 130832
Tssr130833 15 25774191 to 25774196 5 + TSS region transcription start site region 130833
Tssr130834 15 25774240 to 25774254 14 + TSS region transcription start site region 130834
Tssr130835 15 25776383 to 25776397 14 + TSS region transcription start site region 130835
Tssr130836 15 25778119 to 25778140 21 + TSS region transcription start site region 130836
Cpgi6971 15 25779874 to 25780073 199 CpG island CpG island 6971
Tssr130837 15 25779999 to 25780033 34 + TSS region transcription start site region 130837
Cpgi6972 15 25781000 to 25781886 886 CpG island CpG island 6972
Tssr130838 15 25812713 to 25812725 12 + TSS region transcription start site region 130838
Tssr130839 15 25812823 to 25812827 4 + TSS region transcription start site region 130839
Tssr133846 15 25826459 to 25826467 8 - TSS region transcription start site region 133846
Tssr130840 15 25828772 to 25828787 15 + TSS region transcription start site region 130840
Tssr4563 15 25828818 to 25828835 17 + TSS region transcription start site region 4563
Tssr133847 15 25830517 to 25830529 12 - TSS region transcription start site region 133847
Tssr133848 15 25830547 to 25830560 13 - TSS region transcription start site region 133848
Gm4824 15 25840120 to 25840611 491 - pseudogene predicted gene 4824
Cpgi6973 15 25842830 to 25843874 1044 CpG island CpG island 6973
Tssr130841 15 25843139 to 25843188 49 + TSS region transcription start site region 130841
Tssr130842 15 25843192 to 25843241 49 + TSS region transcription start site region 130842
Tssr130843 15 25843242 to 25843249 7 + TSS region transcription start site region 130843
Tssr130844 15 25843251 to 25843262 11 + TSS region transcription start site region 130844
Tssr130845 15 25843268 to 25843280 12 + TSS region transcription start site region 130845
Tssr130846 15 25843285 to 25843345 60 + TSS region transcription start site region 130846
Retreg1 15 25843298 to 25973696 130398 + protein coding gene reticulophagy regulator 1
Tssr130847 15 25843354 to 25843361 7 + TSS region transcription start site region 130847
Tssr130848 15 25843511 to 25843542 31 + TSS region transcription start site region 130848
Tssr133849 15 25843594 to 25843635 41 - TSS region transcription start site region 133849
Cpgi6974 15 25897721 to 25897982 261 CpG island CpG island 6974
Tssr130849 15 25910067 to 25910076 9 + TSS region transcription start site region 130849
Tssr130850 15 25910352 to 25910383 31 + TSS region transcription start site region 130850
Tssr130851 15 25910464 to 25910490 26 + TSS region transcription start site region 130851
Tssr130852 15 25910498 to 25910514 16 + TSS region transcription start site region 130852
Tssr130853 15 25933546 to 25933580 34 + TSS region transcription start site region 130853
Tssr130854 15 25940696 to 25940732 36 + TSS region transcription start site region 130854
Tssr4564 15 25940800 to 25940809 9 + TSS region transcription start site region 4564
Tssr130855 15 25940832 to 25940843 11 + TSS region transcription start site region 130855
Tssr130856 15 25940846 to 25940934 88 + TSS region transcription start site region 130856
Tssr130857 15 25940980 to 25940997 17 + TSS region transcription start site region 130857
Tssr130858 15 25941003 to 25941014 11 + TSS region transcription start site region 130858
Tssr130859 15 25941017 to 25941024 7 + TSS region transcription start site region 130859
Tssr130860 15 25941029 to 25941047 18 + TSS region transcription start site region 130860
Tssr130861 15 25941054 to 25941068 14 + TSS region transcription start site region 130861
Tssr130862 15 25941078 to 25941089 11 + TSS region transcription start site region 130862
Tssr130863 15 25941108 to 25941129 21 + TSS region transcription start site region 130863
Tssr130864 15 25941144 to 25941155 11 + TSS region transcription start site region 130864
Mir7212 15 25948227 to 25948287 60 + miRNA gene microRNA 7212
D15Mit253 15 25958454 to 25958542 88 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 253
Tssr130865 15 25971907 to 25971912 5 + TSS region transcription start site region 130865
Tssr130866 15 25971979 to 25971991 12 + TSS region transcription start site region 130866
Cpgi6975 15 25983980 to 25985448 1468 CpG island CpG island 6975
Tssr130867 15 25984333 to 25984336 3 + TSS region transcription start site region 130867
Tssr130868 15 25984359 to 25984373 14 + TSS region transcription start site region 130868
Zfp622 15 25984366 to 25998481 14115 + protein coding gene zinc finger protein 622
Tssr130869 15 25984383 to 25984391 8 + TSS region transcription start site region 130869
Tssr130870 15 25984397 to 25984451 54 + TSS region transcription start site region 130870
Tssr130871 15 25984462 to 25984477 15 + TSS region transcription start site region 130871
Tssr130872 15 25984480 to 25984491 11 + TSS region transcription start site region 130872
D15Mit9 15 26035594 to 26035731 137 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 9
Dob9 15 26035594 to 37781057 11745463 QTL dietary obesity 9
Gm41279 15 26054365 to 26062438 8073 - lincRNA gene predicted gene, 41279
Tssr133850 15 26062513 to 26062537 24 - TSS region transcription start site region 133850
Cpgi6976 15 26308452 to 26309929 1477 CpG island CpG island 6976
Tssr130873 15 26308791 to 26308800 9 + TSS region transcription start site region 130873
Tssr130874 15 26308861 to 26308875 14 + TSS region transcription start site region 130874
Tssr130875 15 26309020 to 26309026 6 + TSS region transcription start site region 130875
Tssr130876 15 26309039 to 26309055 16 + TSS region transcription start site region 130876
March11 15 26309048 to 26409576 100528 + protein coding gene membrane-associated ring finger (C3HC4) 11
Tssr130877 15 26362200 to 26362201 1 + TSS region transcription start site region 130877
Tssr133851 15 26402284 to 26402303 19 - TSS region transcription start site region 133851
Tssr133852 15 26402310 to 26402317 7 - TSS region transcription start site region 133852
Gm36790 15 26448793 to 26462193 13400 + lncRNA gene predicted gene, 36790
Fbxl7 15 26540454 to 26895564 355110 - protein coding gene F-box and leucine-rich repeat protein 7
Cpgi6977 15 26543233 to 26543832 599 CpG island CpG island 6977
Cpgi6978 15 26552670 to 26552962 292 CpG island CpG island 6978
Gm49267 15 26609503 to 26644048 34545 + antisense lncRNA gene predicted gene, 49267
Tssr4565 15 26610797 to 26610801 4 - TSS region transcription start site region 4565
D15Mit135 15 26637316 to 26637462 146 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 135
Tssr133853 15 26639527 to 26639528 1 - TSS region transcription start site region 133853
9430068D22Rik 15 26644635 to 26645289 654 - unclassified gene RIKEN cDNA 9430068D22 gene
Gm49265 15 26672937 to 26674753 1816 - unclassified gene predicted gene, 49265
Gm49268 15 26688400 to 26691667 3267 + unclassified gene predicted gene, 49268
9430091N11Rik 15 26696429 to 26698544 2115 unclassified gene RIKEN cDNA 9430091N11 gene
Tssr133854 15 26705750 to 26705754 4 - TSS region transcription start site region 133854
Tssr133855 15 26715354 to 26715367 13 - TSS region transcription start site region 133855
Gm6330 15 26728287 to 26729716 1429 - pseudogene predicted gene 6330
Gm49266 15 26743232 to 26746137 2905 - unclassified gene predicted gene, 49266
Tssr133856 15 26743506 to 26743519 13 - TSS region transcription start site region 133856
Tssr133857 15 26743559 to 26743570 11 - TSS region transcription start site region 133857
Tssr133858 15 26761570 to 26761575 5 - TSS region transcription start site region 133858
Gm18684 15 26775051 to 26776472 1421 + pseudogene predicted gene, 18684
Gm18093 15 26784231 to 26785059 828 + pseudogene predicted gene, 18093
Tssr133859 15 26816527 to 26816541 14 - TSS region transcription start site region 133859
Cpgi6979 15 26894771 to 26896086 1315 CpG island CpG island 6979
Tssr133860 15 26895539 to 26895558 19 - TSS region transcription start site region 133860
Tssr133861 15 26895578 to 26895585 7 - TSS region transcription start site region 133861
Tssr133862 15 26895949 to 26895967 18 - TSS region transcription start site region 133862
Tssr130878 15 26974234 to 26974241 7 + TSS region transcription start site region 130878
Tssr130879 15 27025296 to 27025298 2 + TSS region transcription start site region 130879
Gm6576 15 27025328 to 27026210 882 + pseudogene predicted gene 6576
Gm23903 15 27061736 to 27061866 130 - snoRNA gene predicted gene, 23903
Cpgi6980 15 27208278 to 27208477 199 CpG island CpG island 6980
Gm19111 15 27367939 to 27368990 1051 + pseudogene predicted gene, 19111
D15Mit94 15 27443957 to 27444106 149 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 94
Gm36899 15 27460088 to 27462835 2747 - lincRNA gene predicted gene, 36899
Cpgi6981 15 27466055 to 27467501 1446 CpG island CpG island 6981
Tssr130880 15 27466597 to 27466608 11 + TSS region transcription start site region 130880
Tssr130881 15 27466647 to 27466696 49 + TSS region transcription start site region 130881
Ank 15 27466677 to 27594909 128232 + protein coding gene progressive ankylosis
Tssr130882 15 27466700 to 27466721 21 + TSS region transcription start site region 130882
Tssr130883 15 27466781 to 27466798 17 + TSS region transcription start site region 130883
Tssr130884 15 27466812 to 27466828 16 + TSS region transcription start site region 130884
Tssr130885 15 27466837 to 27466862 25 + TSS region transcription start site region 130885
Cpgi6982 15 27476484 to 27476649 165 CpG island CpG island 6982
Tiaf2 15 27479006 to 27480902 1896 + unclassified gene TGF-beta1-induced anti-apoptotic factor 2
Tssr130886 15 27488261 to 27488301 40 + TSS region transcription start site region 130886
B230362B09Rik 15 27503912 to 27505532 1620 + unclassified gene RIKEN cDNA B230362B09 gene
D15Ertd30e 15 27509354 to 27509589 235 DNA segment DNA segment, Chr 15, ERATO Doi 30, expressed
Gm29901 15 27516350 to 27517352 1002 - lncRNA gene predicted gene, 29901
Tssr133863 15 27518761 to 27518767 6 - TSS region transcription start site region 133863
Tssr130887 15 27570373 to 27570376 3 + TSS region transcription start site region 130887
Tssr4566 15 27571360 to 27571368 8 + TSS region transcription start site region 4566
Tssr130888 15 27571372 to 27571394 22 + TSS region transcription start site region 130888
Tssr130889 15 27571398 to 27571417 19 + TSS region transcription start site region 130889
Mir7117 15 27571494 to 27571558 64 + miRNA gene microRNA 7117
Tssr130890 15 27571542 to 27571577 35 + TSS region transcription start site region 130890
Tssr130891 15 27571582 to 27571592 10 + TSS region transcription start site region 130891
Tssr130892 15 27571596 to 27571616 20 + TSS region transcription start site region 130892
D15Mit164.2 15 27582231 to 27582341 110 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 164.2
D15Mit164 15 27582331 to 27582471 140 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 164
D15Mit20 15 27582373 to 27582523 150 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 20
Otulin 15 27605917 to 27630980 25063 - protein coding gene OTU deubiquitinase with linear linkage specificity
Tssr133864 15 27619267 to 27619295 28 - TSS region transcription start site region 133864
Cpgi6983 15 27630022 to 27631186 1164 CpG island CpG island 6983
Tssr133865 15 27630644 to 27630714 70 - TSS region transcription start site region 133865
Tssr130893 15 27636477 to 27636481 4 + TSS region transcription start site region 130893
Gm46506 15 27636511 to 27636895 384 + pseudogene predicted gene, 46506
Tssr130894 15 27641471 to 27641482 11 + TSS region transcription start site region 130894
Otulinl 15 27655069 to 27681579 26510 - protein coding gene OTU deubiquitinase with linear linkage specificity like
Tssr133866 15 27661550 to 27661551 1 - TSS region transcription start site region 133866
Tssr133867 15 27663332 to 27663388 56 - TSS region transcription start site region 133867
Tssr133868 15 27663422 to 27663440 18 - TSS region transcription start site region 133868
Tssr133869 15 27663493 to 27663518 25 - TSS region transcription start site region 133869
Tssr133870 15 27663553 to 27663564 11 - TSS region transcription start site region 133870
Tssr133871 15 27663636 to 27663649 13 - TSS region transcription start site region 133871
Tssr133872 15 27664367 to 27664380 13 - TSS region transcription start site region 133872
Cpgi6984 15 27665382 to 27665760 378 CpG island CpG island 6984
Tssr133873 15 27670942 to 27670955 13 - TSS region transcription start site region 133873
C130098B18Rik 15 27677356 to 27680082 2726 unclassified gene RIKEN cDNA C130098B18 gene
Tssr133874 15 27680117 to 27680158 41 - TSS region transcription start site region 133874
Cpgi6985 15 27680704 to 27682030 1326 CpG island CpG island 6985
Tssr133875 15 27681484 to 27681495 11 - TSS region transcription start site region 133875
Tssr133876 15 27681498 to 27681554 56 - TSS region transcription start site region 133876
Tssr133877 15 27681573 to 27681584 11 - TSS region transcription start site region 133877
Tssr130895 15 27681664 to 27681676 12 + TSS region transcription start site region 130895
Tssr133878 15 27697733 to 27697746 13 - TSS region transcription start site region 133878
Tssr133879 15 27697775 to 27697794 19 - TSS region transcription start site region 133879
Trio 15 27730651 to 28025848 295197 - protein coding gene triple functional domain (PTPRF interacting)
Tssr130896 15 27741194 to 27741198 4 + TSS region transcription start site region 130896
Cpgi6986 15 27747654 to 27748121 467 CpG island CpG island 6986
Tssr133880 15 27755472 to 27755478 6 - TSS region transcription start site region 133880
Tssr133881 15 27763052 to 27763059 7 - TSS region transcription start site region 133881