Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:23797566-25917579

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140 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18582 15 23851740 to 23853910 2170 - pseudogene predicted gene, 18582
D15Mit280 15 24092854 to 24093003 149 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-280
Gm48918 15 24095965 to 24099207 3242 - unclassified gene predicted gene, 48918
Gm48919 15 24129821 to 24130185 364 - pseudogene predicted gene, 48919
Gm8408 15 24203884 to 24205338 1454 - pseudogene predicted gene 8408
Gm49729 15 24254986 to 24375675 120689 - lincRNA gene predicted gene, 49729
Tssr130796 15 24255563 to 24255566 3 + TSS region transcription start site region 130796
Tssr133812 15 24306916 to 24306918 2 - TSS region transcription start site region 133812
Gm36147 15 24357462 to 24358914 1452 + pseudogene predicted gene, 36147
4930540I17Rik 15 24373610 to 24375627 2017 - unclassified gene RIKEN cDNA 4930540I17 gene
D15Mit267 15 24387795 to 24388090 295 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 267
Pgia8 15 24388090 to 3210685 -21177405 QTL proteoglycan induced arthritis 8
Gm48920 15 24605059 to 24605478 419 - pseudogene predicted gene, 48920
Tssr133813 15 24605521 to 24605526 5 - TSS region transcription start site region 133813
Gm48921 15 24650868 to 24651141 273 + pseudogene predicted gene, 48921
Gm2803 15 24724160 to 24724793 633 - pseudogene predicted gene 2803
Tssr133814 15 24724815 to 24724831 16 - TSS region transcription start site region 133814
Tssr133815 15 24724839 to 24724849 10 - TSS region transcription start site region 133815
Gm35827 15 24724917 to 24737195 12278 + lncRNA gene predicted gene, 35827
Gm22810 15 24820545 to 24820702 157 - snRNA gene predicted gene, 22810
Gm35769 15 24849672 to 24907208 57536 - lincRNA gene predicted gene, 35769
Tssr133816 15 24857530 to 24857548 18 - TSS region transcription start site region 133816
Tssr133817 15 24857566 to 24857579 13 - TSS region transcription start site region 133817
Tssr133818 15 24857660 to 24857691 31 - TSS region transcription start site region 133818
Tssr130797 15 24945482 to 24945485 3 + TSS region transcription start site region 130797
Gm2824 15 24981620 to 25027358 45738 - lincRNA gene predicted gene 2824
Tssr133819 15 25057109 to 25057113 4 - TSS region transcription start site region 133819
Gm35996 15 25101020 to 25128404 27384 - lincRNA gene predicted gene, 35996
Tssr133820 15 25135622 to 25135651 29 - TSS region transcription start site region 133820
9230109A22Rik 15 25137530 to 25238830 101300 - lincRNA gene RIKEN cDNA 9230109A22 gene
Tssr133821 15 25149072 to 25149100 28 - TSS region transcription start site region 133821
5830426I08Rik 15 25225503 to 25225854 351 - unclassified gene RIKEN cDNA 5830426I08 gene
Gm38341 15 25227517 to 25228031 514 - unclassified gene predicted gene, 38341
4930445E18Rik 15 25281439 to 25292174 10735 - lincRNA gene RIKEN cDNA 4930445E18 gene
Tssr133822 15 25332632 to 25332670 38 - TSS region transcription start site region 133822
Gm36555 15 25332667 to 25344091 11424 + lncRNA gene predicted gene, 36555
Tssr130798 15 25363275 to 25363303 28 + TSS region transcription start site region 130798
Basp1 15 25363277 to 25413764 50487 - protein coding gene brain abundant, membrane attached signal protein 1
Tssr130799 15 25363487 to 25363499 12 + TSS region transcription start site region 130799
Tssr133823 15 25363520 to 25363541 21 - TSS region transcription start site region 133823
Tssr133824 15 25363545 to 25363559 14 - TSS region transcription start site region 133824
Tssr133825 15 25363698 to 25363709 11 - TSS region transcription start site region 133825
Tssr133826 15 25363751 to 25363805 54 - TSS region transcription start site region 133826
Tssr133827 15 25363809 to 25363831 22 - TSS region transcription start site region 133827
Tssr133828 15 25363971 to 25363983 12 - TSS region transcription start site region 133828
Tssr133829 15 25363997 to 25364011 14 - TSS region transcription start site region 133829
Cpgi6967 15 25364150 to 25365074 924 CpG island CpG island 6967
Tssr133830 15 25364159 to 25364249 90 - TSS region transcription start site region 133830
Tssr133831 15 25364258 to 25364297 39 - TSS region transcription start site region 133831
Tssr130800 15 25364720 to 25364745 25 + TSS region transcription start site region 130800
Tssr133832 15 25364800 to 25364814 14 - TSS region transcription start site region 133832
Tssr130801 15 25364821 to 25364891 70 + TSS region transcription start site region 130801
Tssr133833 15 25364826 to 25364838 12 - TSS region transcription start site region 133833
Tssr133834 15 25364860 to 25364924 64 - TSS region transcription start site region 133834
Tssr133835 15 25364980 to 25364987 7 - TSS region transcription start site region 133835
Tssr133836 15 25390457 to 25390478 21 - TSS region transcription start site region 133836
Tssr133837 15 25390626 to 25390640 14 - TSS region transcription start site region 133837
Tssr133838 15 25396025 to 25396026 1 - TSS region transcription start site region 133838
Cpgi6968 15 25412367 to 25414936 2569 CpG island CpG island 6968
Tssr133839 15 25413728 to 25413745 17 - TSS region transcription start site region 133839
Tssr133840 15 25413752 to 25413773 21 - TSS region transcription start site region 133840
Tssr130802 15 25414175 to 25414197 22 + TSS region transcription start site region 130802
Gm5468 15 25414192 to 25414873 681 + lincRNA gene predicted gene 5468
Tssr130803 15 25414305 to 25414316 11 + TSS region transcription start site region 130803
Gm48956 15 25414637 to 25445640 31003 - lincRNA gene predicted gene, 48956
Gm48957 15 25415022 to 25464362 49340 + unclassified non-coding RNA gene predicted gene, 48957
Tssr4562 15 25426026 to 25426027 1 + TSS region transcription start site region 4562
Tssr133841 15 25445633 to 25445643 10 - TSS region transcription start site region 133841
D15Mit110 15 25456364 to 25456488 124 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 110
Gm36642 15 25528879 to 25593091 64212 - lincRNA gene predicted gene, 36642
Cpgi6969 15 25621989 to 25623493 1504 CpG island CpG island 6969
Tssr130804 15 25622525 to 25622558 33 + TSS region transcription start site region 130804
Myo10 15 25622550 to 25813671 191121 + protein coding gene myosin X
Tssr130805 15 25622566 to 25622581 15 + TSS region transcription start site region 130805
Tssr130806 15 25622747 to 25622754 7 + TSS region transcription start site region 130806
Tssr130807 15 25622759 to 25622777 18 + TSS region transcription start site region 130807
Tssr130808 15 25626182 to 25626207 25 + TSS region transcription start site region 130808
Tssr130809 15 25626221 to 25626233 12 + TSS region transcription start site region 130809
Tssr130810 15 25626417 to 25626440 23 + TSS region transcription start site region 130810
Tssr130811 15 25626449 to 25626472 23 + TSS region transcription start site region 130811
Tssr130812 15 25632332 to 25632341 9 + TSS region transcription start site region 130812
Gm48996 15 25634627 to 25638243 3616 + unclassified gene predicted gene, 48996
Tssr130813 15 25655135 to 25655166 31 + TSS region transcription start site region 130813
Tssr130814 15 25655263 to 25655272 9 + TSS region transcription start site region 130814
Gm2862 15 25681798 to 25682125 327 + pseudogene predicted gene 2862
D15Mit127 15 25686036 to 25686171 135 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 127
Tssr130815 15 25708263 to 25708268 5 + TSS region transcription start site region 130815
Cpgi6970 15 25713686 to 25714383 697 CpG island CpG island 6970
Tssr130816 15 25713870 to 25713885 15 + TSS region transcription start site region 130816
Tssr130817 15 25724811 to 25724822 11 + TSS region transcription start site region 130817
Tssr130818 15 25726627 to 25726630 3 + TSS region transcription start site region 130818
Tssr130819 15 25742314 to 25742322 8 + TSS region transcription start site region 130819
Tssr130820 15 25749953 to 25749980 27 + TSS region transcription start site region 130820
Tssr133842 15 25751611 to 25751620 9 - TSS region transcription start site region 133842
Tssr130821 15 25751787 to 25751799 12 + TSS region transcription start site region 130821
Tssr130822 15 25752860 to 25752897 37 + TSS region transcription start site region 130822
Tssr130823 15 25753198 to 25753212 14 + TSS region transcription start site region 130823
Tssr130824 15 25753230 to 25753241 11 + TSS region transcription start site region 130824
Tssr133843 15 25754006 to 25754016 10 - TSS region transcription start site region 133843
Tssr130825 15 25754784 to 25754796 12 + TSS region transcription start site region 130825
Tssr130826 15 25754821 to 25754838 17 + TSS region transcription start site region 130826
Tssr130827 15 25754871 to 25754898 27 + TSS region transcription start site region 130827
Tssr130828 15 25755243 to 25755248 5 + TSS region transcription start site region 130828
Tssr130829 15 25758755 to 25758776 21 + TSS region transcription start site region 130829
Tssr130830 15 25758779 to 25758793 14 + TSS region transcription start site region 130830
Tssr133844 15 25765077 to 25765115 38 - TSS region transcription start site region 133844
Tssr133845 15 25766584 to 25766595 11 - TSS region transcription start site region 133845
Tssr130831 15 25773985 to 25774042 57 + TSS region transcription start site region 130831
Tssr130832 15 25774072 to 25774092 20 + TSS region transcription start site region 130832
Tssr130833 15 25774191 to 25774196 5 + TSS region transcription start site region 130833
Tssr130834 15 25774240 to 25774254 14 + TSS region transcription start site region 130834
Tssr130835 15 25776383 to 25776397 14 + TSS region transcription start site region 130835
Tssr130836 15 25778119 to 25778140 21 + TSS region transcription start site region 130836
Cpgi6971 15 25779874 to 25780073 199 CpG island CpG island 6971
Tssr130837 15 25779999 to 25780033 34 + TSS region transcription start site region 130837
Cpgi6972 15 25781000 to 25781886 886 CpG island CpG island 6972
Tssr130838 15 25812713 to 25812725 12 + TSS region transcription start site region 130838
Tssr130839 15 25812823 to 25812827 4 + TSS region transcription start site region 130839
Tssr133846 15 25826459 to 25826467 8 - TSS region transcription start site region 133846
Tssr130840 15 25828772 to 25828787 15 + TSS region transcription start site region 130840
Tssr4563 15 25828818 to 25828835 17 + TSS region transcription start site region 4563
Tssr133847 15 25830517 to 25830529 12 - TSS region transcription start site region 133847
Tssr133848 15 25830547 to 25830560 13 - TSS region transcription start site region 133848
Gm4824 15 25840120 to 25840611 491 - pseudogene predicted gene 4824
Cpgi6973 15 25842830 to 25843874 1044 CpG island CpG island 6973
Tssr130841 15 25843139 to 25843188 49 + TSS region transcription start site region 130841
Tssr130842 15 25843192 to 25843241 49 + TSS region transcription start site region 130842
Tssr130843 15 25843242 to 25843249 7 + TSS region transcription start site region 130843
Tssr130844 15 25843251 to 25843262 11 + TSS region transcription start site region 130844
Tssr130845 15 25843268 to 25843280 12 + TSS region transcription start site region 130845
Tssr130846 15 25843285 to 25843345 60 + TSS region transcription start site region 130846
Retreg1 15 25843298 to 25973696 130398 + protein coding gene reticulophagy regulator 1
Tssr130847 15 25843354 to 25843361 7 + TSS region transcription start site region 130847
Tssr130848 15 25843511 to 25843542 31 + TSS region transcription start site region 130848
Tssr133849 15 25843594 to 25843635 41 - TSS region transcription start site region 133849
Cpgi6974 15 25897721 to 25897982 261 CpG island CpG island 6974
Tssr130849 15 25910067 to 25910076 9 + TSS region transcription start site region 130849
Tssr130850 15 25910352 to 25910383 31 + TSS region transcription start site region 130850
Tssr130851 15 25910464 to 25910490 26 + TSS region transcription start site region 130851
Tssr130852 15 25910498 to 25910514 16 + TSS region transcription start site region 130852