Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:2354560-4204567

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141 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm9614 15 3053108 to 3053989 881 + pseudogene predicted gene 9614
Gm49222 15 3115609 to 3115772 163 + pseudogene predicted gene, 49222
Gm49231 15 3128564 to 3160964 32400 + lincRNA gene predicted gene, 49231
Gm49232 15 3177707 to 3180308 2601 + pseudogene predicted gene, 49232
D15Mit12 15 3210685 to 3210836 151 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 12
Gm7962 15 3217194 to 3218952 1758 - pseudogene predicted gene 7962
Tssr133561 15 3219714 to 3219746 32 - TSS region transcription start site region 133561
Gm30057 15 3251034 to 3254873 3839 + lncRNA gene predicted gene, 30057
Tssr130379 15 3251263 to 3251268 5 + TSS region transcription start site region 130379
Selenop 15 3270767 to 3280508 9741 + protein coding gene selenoprotein P
Tssr130380 15 3270971 to 3271006 35 + TSS region transcription start site region 130380
Tssr130381 15 3271390 to 3271410 20 + TSS region transcription start site region 130381
Tssr130382 15 3273159 to 3273193 34 + TSS region transcription start site region 130382
Tssr130383 15 3274654 to 3274671 17 + TSS region transcription start site region 130383
Tssr130384 15 3274678 to 3274691 13 + TSS region transcription start site region 130384
Tssr130385 15 3274701 to 3274795 94 + TSS region transcription start site region 130385
Tssr130386 15 3274799 to 3274845 46 + TSS region transcription start site region 130386
Tssr130387 15 3274871 to 3274885 14 + TSS region transcription start site region 130387
Tssr130388 15 3274889 to 3274903 14 + TSS region transcription start site region 130388
Tssr130389 15 3275031 to 3275042 11 + TSS region transcription start site region 130389
Tssr130390 15 3275211 to 3275222 11 + TSS region transcription start site region 130390
Tssr130391 15 3275556 to 3275591 35 + TSS region transcription start site region 130391
Tssr130392 15 3275593 to 3275665 72 + TSS region transcription start site region 130392
Tssr130393 15 3275669 to 3275703 34 + TSS region transcription start site region 130393
Tssr133562 15 3275704 to 3275769 65 - TSS region transcription start site region 133562
Tssr130394 15 3275708 to 3275729 21 + TSS region transcription start site region 130394
Tssr130395 15 3277152 to 3277195 43 + TSS region transcription start site region 130395
Tssr130396 15 3277211 to 3277232 21 + TSS region transcription start site region 130396
Tssr130397 15 3279121 to 3279130 9 + TSS region transcription start site region 130397
Tssr130398 15 3279157 to 3279183 26 + TSS region transcription start site region 130398
Tssr133563 15 3279189 to 3279237 48 - TSS region transcription start site region 133563
Tssr4538 15 3279257 to 3279260 3 + TSS region transcription start site region 4538
Tssr133564 15 3279261 to 3279268 7 - TSS region transcription start site region 133564
Tssr130399 15 3279265 to 3279272 7 + TSS region transcription start site region 130399
Tssr130400 15 3279285 to 3279296 11 + TSS region transcription start site region 130400
Tssr130401 15 3279299 to 3279304 5 + TSS region transcription start site region 130401
Tssr133565 15 3279309 to 3279312 3 - TSS region transcription start site region 133565
Tssr133566 15 3279315 to 3279324 9 - TSS region transcription start site region 133566
Tssr130402 15 3279367 to 3279368 1 + TSS region transcription start site region 130402
Tssr130403 15 3279399 to 3279415 16 + TSS region transcription start site region 130403
Tssr130404 15 3279439 to 3279457 18 + TSS region transcription start site region 130404
Tssr130405 15 3279459 to 3279475 16 + TSS region transcription start site region 130405
Tssr130406 15 3279490 to 3279501 11 + TSS region transcription start site region 130406
Tssr130407 15 3279524 to 3279537 13 + TSS region transcription start site region 130407
Tssr130408 15 3279560 to 3279567 7 + TSS region transcription start site region 130408
Tssr133567 15 3279562 to 3279575 13 - TSS region transcription start site region 133567
Tssr130409 15 3279569 to 3279584 15 + TSS region transcription start site region 130409
Tssr130410 15 3279590 to 3279610 20 + TSS region transcription start site region 130410
Tssr133568 15 3279633 to 3279702 69 - TSS region transcription start site region 133568
Tssr130411 15 3279646 to 3279658 12 + TSS region transcription start site region 130411
Tssr130412 15 3279721 to 3279739 18 + TSS region transcription start site region 130412
Tssr130413 15 3279974 to 3279977 3 + TSS region transcription start site region 130413
Tssr130414 15 3280022 to 3280031 9 + TSS region transcription start site region 130414
Tssr130415 15 3280096 to 3280108 12 + TSS region transcription start site region 130415
Tssr130416 15 3280393 to 3280398 5 + TSS region transcription start site region 130416
Ccdc152 15 3280588 to 3303526 22938 - protein coding gene coiled-coil domain containing 152
Tssr130417 15 3290758 to 3290771 13 + TSS region transcription start site region 130417
Tssr130418 15 3290847 to 3290862 15 + TSS region transcription start site region 130418
Tssr130419 15 3291106 to 3291145 39 + TSS region transcription start site region 130419
Gm41254 15 3298205 to 3385627 87422 + lncRNA gene predicted gene, 41254
Tssr130420 15 3303287 to 3303290 3 + TSS region transcription start site region 130420
Tssr133569 15 3303521 to 3303569 48 - TSS region transcription start site region 133569
Ghr 15 3317755 to 3583352 265597 - protein coding gene growth hormone receptor
Tssr133570 15 3341102 to 3341106 4 - TSS region transcription start site region 133570
Sicd2 15 3444907 to 71325689 67880782 QTL seizure-induced cell death 2
D15Mit174 15 3444907 to 3445032 125 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 174
Epfpq4 15 3460212 to 78717086 75256874 QTL epididymal fat percentage QTL 4
W3q7 15 3460212 to 78717086 75256874 QTL weight 3 weeks QTL 7
Bdt5 15 3460212 to 3460347 135 QTL bone density traits 5
Cliff 15 3460212 to 3460347 135 QTL cliff drop aversion
Mobq4 15 3460212 to 3460347 135 QTL multigenic obesity QTL 4
D15Mit13 15 3460212 to 3460347 135 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 13
Tailq6 15 3460212 to 78717086 75256874 QTL tail length QTL 6
Tailaq4 15 3460212 to 78717086 75256874 QTL tail length adjusted QTL 4
Nhdlq7 15 3460212 to 3460347 135 QTL non-HDL QTL 7
Faq8 15 3460212 to 3460347 135 QTL fluctuating asymmetry QTL 8
Scfq2 15 3460212 to 78717086 75256874 QTL subcutaneous fat pad weight QTL 2
Sluc24 15 3460212 to 3460347 135 QTL susceptibility to lung cancer 24
Tglq3 15 3460212 to 3460347 135 QTL triglyceride QTL 3
Tssr133571 15 3463852 to 3463858 6 - TSS region transcription start site region 133571
Tssr133572 15 3523215 to 3523219 4 - TSS region transcription start site region 133572
Tssr133573 15 3540950 to 3540954 4 - TSS region transcription start site region 133573
Tssr133574 15 3542350 to 3542361 11 - TSS region transcription start site region 133574
Tssr133575 15 3542371 to 3542380 9 - TSS region transcription start site region 133575
Tssr133576 15 3542397 to 3542408 11 - TSS region transcription start site region 133576
Tssr133577 15 3542411 to 3542421 10 - TSS region transcription start site region 133577
Tssr133578 15 3542437 to 3542455 18 - TSS region transcription start site region 133578
Tssr133579 15 3542457 to 3542484 27 - TSS region transcription start site region 133579
Tssr133580 15 3542544 to 3542574 30 - TSS region transcription start site region 133580
Tssr133581 15 3542615 to 3542632 17 - TSS region transcription start site region 133581
Tssr133582 15 3568703 to 3568705 2 - TSS region transcription start site region 133582
Tssr133583 15 3582136 to 3582151 15 - TSS region transcription start site region 133583
Tssr133584 15 3582161 to 3582181 20 - TSS region transcription start site region 133584
Cpgi6908 15 3582203 to 3582403 200 CpG island CpG island 6908
Tssr133585 15 3582329 to 3582351 22 - TSS region transcription start site region 133585
Tssr133586 15 3582624 to 3582677 53 - TSS region transcription start site region 133586
Cpgi6909 15 3582903 to 3583614 711 CpG island CpG island 6909
Tssr133587 15 3583146 to 3583187 41 - TSS region transcription start site region 133587
Tssr133588 15 3583191 to 3583241 50 - TSS region transcription start site region 133588
Tssr133589 15 3583391 to 3583411 20 - TSS region transcription start site region 133589
Tssr133590 15 3583428 to 3583441 13 - TSS region transcription start site region 133590
Tssr133591 15 3583464 to 3583542 78 - TSS region transcription start site region 133591
Gm22031 15 3603272 to 3603397 125 - snRNA gene predicted gene, 22031
Gm41255 15 3611374 to 3614906 3532 - lncRNA gene predicted gene, 41255
Tssr130421 15 3637418 to 3637428 10 + TSS region transcription start site region 130421
Tssr130422 15 3637448 to 3637458 10 + TSS region transcription start site region 130422
Gm18420 15 3671986 to 3672806 820 + pseudogene predicted gene, 18420
Gm4823 15 3745892 to 3746875 983 - pseudogene predicted gene 4823
Gm23228 15 3798912 to 3799181 269 + unclassified non-coding RNA gene predicted gene, 23228
Gm17873 15 3929985 to 3930560 575 + pseudogene predicted gene, 17873
Fbxo4 15 3965445 to 3979573 14128 - protein coding gene F-box protein 4
Cpgi6910 15 3978974 to 3979757 783 CpG island CpG island 6910
Tssr133592 15 3979432 to 3979562 130 - TSS region transcription start site region 133592
AW549877 15 3982035 to 3995744 13709 - protein coding gene expressed sequence AW549877
Tssr133593 15 3984846 to 3984859 13 - TSS region transcription start site region 133593
Tssr133594 15 3986832 to 3986836 4 - TSS region transcription start site region 133594
Gm49286 15 3991994 to 3992095 101 - pseudogene predicted gene, 49286
Tssr133595 15 3995244 to 3995245 1 - TSS region transcription start site region 133595
Cpgi6911 15 3995361 to 3996293 932 CpG island CpG island 6911
Tssr133596 15 3995708 to 3995760 52 - TSS region transcription start site region 133596
Gm2093 15 3996039 to 4015858 19819 + lincRNA gene predicted gene 2093
BC037032 15 4020114 to 4027405 7291 - lncRNA gene cDNA Sequence BC037032
Cpgi6912 15 4026304 to 4027601 1297 CpG island CpG island 6912
Oxct1 15 4026428 to 4155344 128916 + protein coding gene 3-oxoacid CoA transferase 1
Tssr130423 15 4026460 to 4026471 11 + TSS region transcription start site region 130423
Tssr130424 15 4026556 to 4026567 11 + TSS region transcription start site region 130424
Tssr130425 15 4026612 to 4026695 83 + TSS region transcription start site region 130425
Tssr130426 15 4026696 to 4026763 67 + TSS region transcription start site region 130426
Tssr133597 15 4027345 to 4027355 10 - TSS region transcription start site region 133597
Tssr133598 15 4027394 to 4027419 25 - TSS region transcription start site region 133598
Tssr130427 15 4035465 to 4035466 1 + TSS region transcription start site region 130427
Gm15632 15 4069226 to 4072032 2806 - antisense lncRNA gene predicted gene 15632
Tssr130428 15 4069311 to 4069318 7 + TSS region transcription start site region 130428
Tssr130429 15 4069348 to 4069357 9 + TSS region transcription start site region 130429
Tssr4539 15 4077168 to 4077170 2 + TSS region transcription start site region 4539
Tssr130430 15 4112803 to 4112844 41 + TSS region transcription start site region 130430
Tssr4540 15 4119959 to 4119967 8 + TSS region transcription start site region 4540
Tssr4541 15 4164960 to 4164964 4 + TSS region transcription start site region 4541
D15Mit125 15 4202600 to 4202748 148 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 125
uwl 15 12979006 to 3460212 -9518794 heritable phenotypic marker underwhite-like
Pgia8 15 24388090 to 3210685 -21177405 QTL proteoglycan induced arthritis 8