Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:21647398-25227425

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44373 15 21947331 to 21947499 168 - miRNA gene predicted gene, 44373
Gm49187 15 21958432 to 21959811 1379 + unclassified gene predicted gene, 49187
Gm41278 15 21998357 to 22000400 2043 - lncRNA gene predicted gene, 41278
Tssr130785 15 22018943 to 22018945 2 + TSS region transcription start site region 130785
Gm27525 15 22274070 to 22274176 106 + miRNA gene predicted gene, 27525
Elyms1 15 22472345 to 22472345 0 QTL ENU induced lymphoma susceptibility 1
D15Mit52 15 22509966 to 22510176 210 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 52
Tssr130786 15 22548906 to 22548927 21 + TSS region transcription start site region 130786
Tssr4560 15 22548939 to 22548950 11 + TSS region transcription start site region 4560
Cdh18 15 22549022 to 23474418 925396 + protein coding gene cadherin 18
Tssr130787 15 22549064 to 22549082 18 + TSS region transcription start site region 130787
D15Mit252 15 22620408 to 22620528 120 DNA segment DNA Segment, Chr 15 Massachusetts Institute of Technology 252
Modvl4 15 22620408 to 22620528 120 QTL modifier of vacuolated lens
Hnrnpa1l2-ps2 15 22713868 to 22714830 962 - pseudogene heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2
Tssr133810 15 22714890 to 22714891 1 - TSS region transcription start site region 133810
Tssr130788 15 22789656 to 22789681 25 + TSS region transcription start site region 130788
D15Mit200 15 22825784 to 22825925 141 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 200
D15Ertd529e 15 22896628 to 22896855 227 DNA segment DNA segment, Chr 15, ERATO Doi 529, expressed
Gm19840 15 22935487 to 22937241 1754 + pseudogene predicted gene, 19840
Tssr130789 15 23036397 to 23036408 11 + TSS region transcription start site region 130789
Tssr130790 15 23036420 to 23036441 21 + TSS region transcription start site region 130790
Tssr130791 15 23036449 to 23036492 43 + TSS region transcription start site region 130791
Tssr130792 15 23038378 to 23038386 8 + TSS region transcription start site region 130792
Tssr130793 15 23038848 to 23038852 4 + TSS region transcription start site region 130793
Gm24656 15 23154734 to 23154865 131 + snoRNA gene predicted gene, 24656
Tssr4561 15 23196635 to 23196641 6 + TSS region transcription start site region 4561
Gm49191 15 23401464 to 23414457 12993 - antisense lncRNA gene predicted gene, 49191
Tssr133811 15 23437398 to 23437425 27 - TSS region transcription start site region 133811
Cpgi6966 15 23473962 to 23474220 258 CpG island CpG island 6966
Tssr130794 15 23474454 to 23474458 4 + TSS region transcription start site region 130794
Tssr130795 15 23489867 to 23489869 2 + TSS region transcription start site region 130795
Gm6533 15 23489891 to 23490498 607 + pseudogene predicted gene 6533
Gm48915 15 23623941 to 23624200 259 - pseudogene predicted gene, 48915
Gm23980 15 23646420 to 23646577 157 - snRNA gene predicted gene, 23980
Gm48916 15 23725793 to 23729653 3860 - unclassified gene predicted gene, 48916
Gm18582 15 23851740 to 23853910 2170 - pseudogene predicted gene, 18582
D15Mit280 15 24092854 to 24093003 149 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology-280
Gm48918 15 24095965 to 24099207 3242 - unclassified gene predicted gene, 48918
Gm48919 15 24129821 to 24130185 364 - pseudogene predicted gene, 48919
Gm8408 15 24203884 to 24205338 1454 - pseudogene predicted gene 8408
Gm49729 15 24254986 to 24375675 120689 - lincRNA gene predicted gene, 49729
Tssr130796 15 24255563 to 24255566 3 + TSS region transcription start site region 130796
Tssr133812 15 24306916 to 24306918 2 - TSS region transcription start site region 133812
Gm36147 15 24357462 to 24358914 1452 + pseudogene predicted gene, 36147
4930540I17Rik 15 24373610 to 24375627 2017 - unclassified gene RIKEN cDNA 4930540I17 gene
D15Mit267 15 24387795 to 24388090 295 DNA segment DNA Segment, Chr 15, Massachusetts Institute of Technology 267
Pgia8 15 24388090 to 3210685 -21177405 QTL proteoglycan induced arthritis 8
Gm48920 15 24605059 to 24605478 419 - pseudogene predicted gene, 48920
Tssr133813 15 24605521 to 24605526 5 - TSS region transcription start site region 133813
Gm48921 15 24650868 to 24651141 273 + pseudogene predicted gene, 48921
Gm2803 15 24724160 to 24724793 633 - pseudogene predicted gene 2803
Tssr133814 15 24724815 to 24724831 16 - TSS region transcription start site region 133814
Tssr133815 15 24724839 to 24724849 10 - TSS region transcription start site region 133815
Gm35827 15 24724917 to 24737195 12278 + lncRNA gene predicted gene, 35827
Gm22810 15 24820545 to 24820702 157 - snRNA gene predicted gene, 22810
Gm35769 15 24849672 to 24907208 57536 - lincRNA gene predicted gene, 35769
Tssr133816 15 24857530 to 24857548 18 - TSS region transcription start site region 133816
Tssr133817 15 24857566 to 24857579 13 - TSS region transcription start site region 133817
Tssr133818 15 24857660 to 24857691 31 - TSS region transcription start site region 133818
Tssr130797 15 24945482 to 24945485 3 + TSS region transcription start site region 130797
Gm2824 15 24981620 to 25027358 45738 - lincRNA gene predicted gene 2824
Tssr133819 15 25057109 to 25057113 4 - TSS region transcription start site region 133819
Gm35996 15 25101020 to 25128404 27384 - lincRNA gene predicted gene, 35996
Tssr133820 15 25135622 to 25135651 29 - TSS region transcription start site region 133820
9230109A22Rik 15 25137530 to 25238830 101300 - lincRNA gene RIKEN cDNA 9230109A22 gene
Tssr133821 15 25149072 to 25149100 28 - TSS region transcription start site region 133821
5830426I08Rik 15 25225503 to 25225854 351 - unclassified gene RIKEN cDNA 5830426I08 gene