Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:19389490-21269869

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49162 15 19302948 to 19395422 92474 - lincRNA gene predicted gene, 49162
Gm8341 15 19454755 to 19456352 1597 - pseudogene predicted gene 8341
Tssr130766 15 19632471 to 19632476 5 + TSS region transcription start site region 130766
Gm49166 15 19678232 to 19691806 13574 + lincRNA gene predicted gene, 49166
Gm18741 15 19749723 to 19750440 717 + pseudogene predicted gene, 18741
Gm46498 15 19756404 to 19756819 415 + pseudogene predicted gene, 46498
Gm49176 15 20018466 to 20018865 399 - pseudogene predicted gene, 49176
Gm25976 15 20184832 to 20184961 129 + snoRNA gene predicted gene, 25976
Gm37815 15 20239299 to 20240650 1351 - unclassified gene predicted gene, 37815
Gm19207 15 20283363 to 20284041 678 - pseudogene predicted gene, 19207
Gm49177 15 20329490 to 20329869 379 + pseudogene predicted gene, 49177
Tssr130767 15 20418186 to 20418191 5 + TSS region transcription start site region 130767
Gm49178 15 20423361 to 20423657 296 + pseudogene predicted gene, 49178
Tssr130768 15 20449033 to 20449078 45 + TSS region transcription start site region 130768
Tssr130769 15 20449081 to 20449088 7 + TSS region transcription start site region 130769
Tssr130770 15 20449096 to 20449109 13 + TSS region transcription start site region 130770
Gm49685 15 20449119 to 20979940 530821 + antisense lncRNA gene predicted gene, 49685
Cdh12 15 20449265 to 21589533 1140268 + protein coding gene cadherin 12
Ath22 15 20464566 to 20464566 0 QTL atherosclerosis 22
Tssr130771 15 20491470 to 20491474 4 + TSS region transcription start site region 130771
Tssr130772 15 20520510 to 20520511 1 + TSS region transcription start site region 130772
Tssr130773 15 20538380 to 20538400 20 + TSS region transcription start site region 130773
Tssr130774 15 20568769 to 20568776 7 + TSS region transcription start site region 130774
Gm49182 15 20584781 to 20586753 1972 + unclassified gene predicted gene, 49182
Acot10 15 20665214 to 20666750 1536 - protein coding gene acyl-CoA thioesterase 10
Tssr133809 15 20666764 to 20666780 16 - TSS region transcription start site region 133809
Tssr130775 15 20744235 to 20744238 3 + TSS region transcription start site region 130775
Toa1 15 20807266 to 28493921 7686655 QTL testicular oocyte appearance 1
D15Mit130 15 20807266 to 20807449 183 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 130
D15Mit109 15 20830315 to 20830460 145 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 109
Tssr130776 15 20861360 to 20861361 1 + TSS region transcription start site region 130776
Gm25711 15 20908872 to 20908999 127 + snoRNA gene predicted gene, 25711
Gm27397 15 20920214 to 20920320 106 + miRNA gene predicted gene, 27397
Tssr4559 15 20931346 to 20931347 1 + TSS region transcription start site region 4559
Tssr130777 15 21035043 to 21035047 4 + TSS region transcription start site region 130777
Gm19371 15 21049389 to 21049676 287 + pseudogene predicted gene, 19371
Tssr130778 15 21097694 to 21097695 1 + TSS region transcription start site region 130778
Tssr130779 15 21111342 to 21111356 14 + TSS region transcription start site region 130779
Gm25101 15 21114369 to 21114475 106 + snRNA gene predicted gene, 25101
Gm38234 15 21180157 to 21180577 420 + unclassified gene predicted gene, 38234